Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:10487328-10937631

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30 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Pacrg 17 10403009 to 10840191 437182 - protein coding gene PARK2 co-regulated
A230009B12Rik 17 10456216 to 10493057 36841 + antisense lncRNA gene RIKEN cDNA A230009B12 gene
Tssr142575 17 10496331 to 10496342 11 + TSS region transcription start site region 142575
Tssr142576 17 10496371 to 10496396 25 + TSS region transcription start site region 142576
Tssr142577 17 10496414 to 10496428 14 + TSS region transcription start site region 142577
Tssr142578 17 10496434 to 10496441 7 + TSS region transcription start site region 142578
Gm16168 17 10496446 to 10569396 72950 + antisense lncRNA gene predicted gene 16168
D17Wtc1 17 10611363 to 10611577 214 DNA segment DNA segment, Chr 17, Wellcome Trust Centre
Tssr146401 17 10631123 to 10631164 41 - TSS region transcription start site region 146401
Tssr142579 17 10703202 to 10703207 5 + TSS region transcription start site region 142579
D17Jcs116 17 10712328 to 10712631 303 DNA segment DNA segment, Chr 17, John C. Schimenti 116
Tssr146402 17 10721537 to 10721550 13 - TSS region transcription start site region 146402
Tssr146403 17 10721555 to 10721558 3 - TSS region transcription start site region 146403
Gm16169 17 10807716 to 10818826 11110 + lncRNA gene predicted gene 16169
Tssr142580 17 10807827 to 10807841 14 + TSS region transcription start site region 142580
Cpgi8609 17 10839810 to 10841128 1318 CpG island CpG island 8609
Tssr146404 17 10839991 to 10840000 9 - TSS region transcription start site region 146404
Tssr146405 17 10840106 to 10840120 14 - TSS region transcription start site region 146405
Tssr146406 17 10840125 to 10840197 72 - TSS region transcription start site region 146406
Tssr146407 17 10840251 to 10840263 12 - TSS region transcription start site region 146407
Tssr146408 17 10840273 to 10840284 11 - TSS region transcription start site region 146408
Tssr146409 17 10840285 to 10840299 14 - TSS region transcription start site region 146409
Tssr146410 17 10840315 to 10840323 8 - TSS region transcription start site region 146410
Tssr142581 17 10840361 to 10840405 44 + TSS region transcription start site region 142581
Prkn 17 10840384 to 12063361 1222977 + protein coding gene parkin RBR E3 ubiquitin protein ligase
Tssr142582 17 10840422 to 10840437 15 + TSS region transcription start site region 142582
Tssr146411 17 10840565 to 10840585 20 - TSS region transcription start site region 146411
D17Jcs117 17 10855525 to 10855843 318 DNA segment DNA segment, Chr 17, John C. Schimenti 117
Tssr142583 17 10865099 to 10865103 4 + TSS region transcription start site region 142583
Gm3145 17 10898995 to 10899214 219 + pseudogene predicted gene 3145