Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:10271564-10474779

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35 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Qk 17 10206471 to 10319361 112890 - protein coding gene quaking
Tssr146387 17 10274021 to 10274053 32 - TSS region transcription start site region 146387
D17Jcs114 17 10275603 to 10275866 263 DNA segment DNA segment, Chr 17, John C. Schimenti 114
Tssr146388 17 10280610 to 10280614 4 - TSS region transcription start site region 146388
Tssr146389 17 10282887 to 10282903 16 - TSS region transcription start site region 146389
Tssr146390 17 10286690 to 10286697 7 - TSS region transcription start site region 146390
Tssr146391 17 10294528 to 10294531 3 - TSS region transcription start site region 146391
D17Mit58 17 10296552 to 10296770 218 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 58
Tssr142569 17 10304474 to 10304476 2 + TSS region transcription start site region 142569
Dep1 17 10313184 to 10317847 4663 unclassified non-coding RNA gene diabetic embryopathy 1
Cpgi8605 17 10317969 to 10320466 2497 CpG island CpG island 8605
Tssr142570 17 10318320 to 10318337 17 + TSS region transcription start site region 142570
Tssr146392 17 10319235 to 10319251 16 - TSS region transcription start site region 146392
Tssr146393 17 10319260 to 10319282 22 - TSS region transcription start site region 146393
Tssr146394 17 10319283 to 10319294 11 - TSS region transcription start site region 146394
Tssr146395 17 10319296 to 10319317 21 - TSS region transcription start site region 146395
Tssr146396 17 10319324 to 10319380 56 - TSS region transcription start site region 146396
Tssr146397 17 10319381 to 10319392 11 - TSS region transcription start site region 146397
Gm46608 17 10319476 to 10321262 1786 - protein coding gene predicted gene, 46608
Tssr146398 17 10319596 to 10319614 18 - TSS region transcription start site region 146398
Tssr146399 17 10319748 to 10319799 51 - TSS region transcription start site region 146399
Tssr142571 17 10319894 to 10319932 38 + TSS region transcription start site region 142571
Cahm 17 10319919 to 10321141 1222 + lncRNA gene colon adenocarcinoma hypermethylated RNA
Tssr146400 17 10320326 to 10320346 20 - TSS region transcription start site region 146400
Tssr142572 17 10324594 to 10324611 17 + TSS region transcription start site region 142572
1700110C19Rik 17 10324602 to 10329307 4705 + lincRNA gene RIKEN cDNA 1700110C19 gene
Tssr142573 17 10324614 to 10324623 9 + TSS region transcription start site region 142573
Cpgi8606 17 10335069 to 10335703 634 CpG island CpG island 8606
Gm39565 17 10371564 to 10374779 3215 + lncRNA gene predicted gene, 39565
Cpgi8607 17 10371979 to 10372150 171 CpG island CpG island 8607
Cpgi8608 17 10389445 to 10389862 417 CpG island CpG island 8608
Pacrg 17 10403009 to 10840191 437182 - protein coding gene PARK2 co-regulated
D17Jcs115 17 10413849 to 10414049 200 DNA segment DNA segment, Chr 17, John C. Schimenti 115
A230009B12Rik 17 10456216 to 10493057 36841 + antisense lncRNA gene RIKEN cDNA A230009B12 gene
Tssr142574 17 10456293 to 10456298 5 + TSS region transcription start site region 142574