Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:10196552-10396770

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47 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Qk 17 10206471 to 10319361 112890 - protein coding gene quaking
Tssr146372 17 10209422 to 10209433 11 - TSS region transcription start site region 146372
Tssr146373 17 10211719 to 10211739 20 - TSS region transcription start site region 146373
Tssr146374 17 10212020 to 10212055 35 - TSS region transcription start site region 146374
Tssr146375 17 10212059 to 10212083 24 - TSS region transcription start site region 146375
Tssr146376 17 10212158 to 10212170 12 - TSS region transcription start site region 146376
Tssr146377 17 10212421 to 10212447 26 - TSS region transcription start site region 146377
Tssr146378 17 10213158 to 10213176 18 - TSS region transcription start site region 146378
Tssr146379 17 10215212 to 10215245 33 - TSS region transcription start site region 146379
Tssr146380 17 10216238 to 10216263 25 - TSS region transcription start site region 146380
Tssr146381 17 10216271 to 10216307 36 - TSS region transcription start site region 146381
Tssr146382 17 10216385 to 10216412 27 - TSS region transcription start site region 146382
Tssr146383 17 10216775 to 10216779 4 - TSS region transcription start site region 146383
Tssr146384 17 10231118 to 10231122 4 - TSS region transcription start site region 146384
D17Jcs113 17 10240945 to 10241245 300 DNA segment DNA segment, Chr 17, John C. Schimenti 113
Tssr146385 17 10244919 to 10244920 1 - TSS region transcription start site region 146385
Tssr146386 17 10265493 to 10265502 9 - TSS region transcription start site region 146386
Tssr146387 17 10274021 to 10274053 32 - TSS region transcription start site region 146387
D17Jcs114 17 10275603 to 10275866 263 DNA segment DNA segment, Chr 17, John C. Schimenti 114
Tssr146388 17 10280610 to 10280614 4 - TSS region transcription start site region 146388
Tssr146389 17 10282887 to 10282903 16 - TSS region transcription start site region 146389
Tssr146390 17 10286690 to 10286697 7 - TSS region transcription start site region 146390
Tssr146391 17 10294528 to 10294531 3 - TSS region transcription start site region 146391
D17Mit58 17 10296552 to 10296770 218 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 58
Tssr142569 17 10304474 to 10304476 2 + TSS region transcription start site region 142569
Dep1 17 10313184 to 10317847 4663 unclassified non-coding RNA gene diabetic embryopathy 1
Cpgi8605 17 10317969 to 10320466 2497 CpG island CpG island 8605
Tssr142570 17 10318320 to 10318337 17 + TSS region transcription start site region 142570
Tssr146392 17 10319235 to 10319251 16 - TSS region transcription start site region 146392
Tssr146393 17 10319260 to 10319282 22 - TSS region transcription start site region 146393
Tssr146394 17 10319283 to 10319294 11 - TSS region transcription start site region 146394
Tssr146395 17 10319296 to 10319317 21 - TSS region transcription start site region 146395
Tssr146396 17 10319324 to 10319380 56 - TSS region transcription start site region 146396
Tssr146397 17 10319381 to 10319392 11 - TSS region transcription start site region 146397
Gm46608 17 10319476 to 10321262 1786 - protein coding gene predicted gene, 46608
Tssr146398 17 10319596 to 10319614 18 - TSS region transcription start site region 146398
Tssr146399 17 10319748 to 10319799 51 - TSS region transcription start site region 146399
Tssr142571 17 10319894 to 10319932 38 + TSS region transcription start site region 142571
Cahm 17 10319919 to 10321141 1222 + lncRNA gene colon adenocarcinoma hypermethylated RNA
Tssr146400 17 10320326 to 10320346 20 - TSS region transcription start site region 146400
Tssr142572 17 10324594 to 10324611 17 + TSS region transcription start site region 142572
1700110C19Rik 17 10324602 to 10329307 4705 + lincRNA gene RIKEN cDNA 1700110C19 gene
Tssr142573 17 10324614 to 10324623 9 + TSS region transcription start site region 142573
Cpgi8606 17 10335069 to 10335703 634 CpG island CpG island 8606
Gm39565 17 10371564 to 10374779 3215 + lncRNA gene predicted gene, 39565
Cpgi8607 17 10371979 to 10372150 171 CpG island CpG island 8607
Cpgi8608 17 10389445 to 10389862 417 CpG island CpG island 8608