Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:97851972-98141990

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27 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi8535 16 97850839 to 97852133 1294 CpG island CpG island 8535
C2cd2 16 97855209 to 97922651 67442 - protein coding gene C2 calcium-dependent domain containing 2
Mir6964 16 97877233 to 97877291 58 - miRNA gene microRNA 6964
Cpgi8536 16 97921833 to 97923034 1201 CpG island CpG island 8536
Tssr142336 16 97922554 to 97922580 26 - TSS region transcription start site region 142336
Tssr142337 16 97922582 to 97922613 31 - TSS region transcription start site region 142337
D16Jhu81 16 97930575 to 97930754 179 DNA segment DNA segment, Chr 16, Johns Hopkins University 81
Gm41514 16 97936231 to 97939391 3160 - lncRNA gene predicted gene, 41514
Zbtb21 16 97945793 to 97962623 16830 - protein coding gene zinc finger and BTB domain containing 21
Tssr4979 16 97948672 to 97948689 17 - TSS region transcription start site region 4979
Cpgi8537 16 97961623 to 97962975 1352 CpG island CpG island 8537
Tssr142338 16 97962186 to 97962198 12 - TSS region transcription start site region 142338
Tssr142339 16 97962205 to 97962276 71 - TSS region transcription start site region 142339
Tssr142340 16 97962581 to 97962636 55 - TSS region transcription start site region 142340
Tssr142341 16 97965203 to 97965207 4 - TSS region transcription start site region 142341
C030010L15Rik 16 97994596 to 97997419 2823 - antisense lncRNA gene RIKEN cDNA C030010L15 gene
Tssr139717 16 97995019 to 97995021 2 + TSS region transcription start site region 139717
Tssr142342 16 97996972 to 97996990 18 - TSS region transcription start site region 142342
Cpgi8538 16 97997144 to 97997421 277 CpG island CpG island 8538
Tssr142343 16 97997214 to 97997226 12 - TSS region transcription start site region 142343
Tssr139718 16 97997313 to 97997362 49 + TSS region transcription start site region 139718
B230307C23Rik 16 97997347 to 98016756 19409 + protein coding gene RIKEN cDNA B230307C23 gene
Vmn2r-ps112 16 98030140 to 98030460 320 + pseudogene vomeronasal 2, receptor, pseudogene 112
A630089N07Rik 16 98062512 to 98082439 19927 - lncRNA gene RIKEN cDNA A630089N07 gene
Cpgi8539 16 98081975 to 98082357 382 CpG island CpG island 8539
Tssr142344 16 98081981 to 98082012 31 - TSS region transcription start site region 142344
Tssr142345 16 98082432 to 98082439 7 - TSS region transcription start site region 142345