MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 16:97645789-97845816

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17 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
repro33	16	32312022 to 97830295	65518273		heritable phenotypic marker	reproductive mutant 33, JAX Reproductive Mutagenesis Program
Tssr142329	16	97659526 to 97659540	14	-	TSS region	transcription start site region 142329
Gm41512	16	97660762 to 97670707	9945	-	lncRNA gene	predicted gene, 41512
Tssr139714	16	97715182 to 97715186	4	+	TSS region	transcription start site region 139714
Gm41513	16	97724176 to 97730186	6010	-	lncRNA gene	predicted gene, 41513
Tssr142330	16	97734807 to 97734839	32	-	TSS region	transcription start site region 142330
Tssr139715	16	97734923 to 97734934	11	+	TSS region	transcription start site region 139715
Ripk4	16	97741933 to 97763755	21822	-	protein coding gene	receptor-interacting serine-threonine kinase 4
Tssr139716	16	97745789 to 97745816	27	+	TSS region	transcription start site region 139716
D16Jhu79	16	97753873 to 97754246	373		DNA segment	DNA segment, Chr 16, Johns Hopkins University 79
Cpgi8534	16	97763039 to 97764127	1088		CpG island	CpG island 8534
Tssr142331	16	97763421 to 97763426	5	-	TSS region	transcription start site region 142331
Tssr142332	16	97763449 to 97763472	23	-	TSS region	transcription start site region 142332
Tssr142333	16	97763712 to 97763780	68	-	TSS region	transcription start site region 142333
Prdm15	16	97791467 to 97851850	60383	-	protein coding gene	PR domain containing 15
Gm49592	16	97801128 to 97801355	227	+	pseudogene	predicted gene, 49592
D16Mit106	16	97830150 to 97830295	145		DNA segment	DNA segment, Chr 16, Massachusetts Institute of Technology 106