Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:96178585-96368602

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45 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Lca5l 16 96158405 to 96192257 33852 - protein coding gene Leber congenital amaurosis 5-like
Cpgi8522 16 96191540 to 96192504 964 CpG island CpG island 8522
Tssr142290 16 96192222 to 96192262 40 - TSS region transcription start site region 142290
Sh3bgr 16 96200450 to 96228935 28485 + protein coding gene SH3-binding domain glutamic acid-rich protein
Tssr139633 16 96200488 to 96200491 3 + TSS region transcription start site region 139633
Tssr139634 16 96200535 to 96200556 21 + TSS region transcription start site region 139634
Tssr139635 16 96200570 to 96200587 17 + TSS region transcription start site region 139635
Tssr139636 16 96200595 to 96200608 13 + TSS region transcription start site region 139636
Tssr139637 16 96200609 to 96200620 11 + TSS region transcription start site region 139637
Tssr139638 16 96200628 to 96200655 27 + TSS region transcription start site region 139638
Tssr139639 16 96200666 to 96200706 40 + TSS region transcription start site region 139639
Tssr4973 16 96200715 to 96200720 5 + TSS region transcription start site region 4973
Tssr139640 16 96205813 to 96205833 20 + TSS region transcription start site region 139640
Tssr139641 16 96205841 to 96205858 17 + TSS region transcription start site region 139641
Tssr139642 16 96205860 to 96205865 5 + TSS region transcription start site region 139642
Tssr139643 16 96206350 to 96206369 19 + TSS region transcription start site region 139643
Tssr139644 16 96214008 to 96214022 14 + TSS region transcription start site region 139644
Tssr139645 16 96219480 to 96219495 15 + TSS region transcription start site region 139645
Tssr142291 16 96220529 to 96220559 30 - TSS region transcription start site region 142291
Cpgi8523 16 96235627 to 96235839 212 CpG island CpG island 8523
B3galt5 16 96235801 to 96319859 84058 + protein coding gene UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 5
D16Jhu62 16 96252316 to 96252509 193 DNA segment DNA segment, Chr 16, Johns Hopkins University 62
Tssr139646 16 96258589 to 96258621 32 + TSS region transcription start site region 139646
Tssr139647 16 96258656 to 96258667 11 + TSS region transcription start site region 139647
Tssr139648 16 96273181 to 96273194 13 + TSS region transcription start site region 139648
Tssr139649 16 96273468 to 96273480 12 + TSS region transcription start site region 139649
Tssr139650 16 96273484 to 96273523 39 + TSS region transcription start site region 139650
Tssr139651 16 96273585 to 96273602 17 + TSS region transcription start site region 139651
Tssr139652 16 96273603 to 96273616 13 + TSS region transcription start site region 139652
Cpgi8524 16 96280574 to 96281158 584 CpG island CpG island 8524
Tssr4974 16 96280801 to 96280867 66 + TSS region transcription start site region 4974
Tssr139653 16 96280982 to 96280994 12 + TSS region transcription start site region 139653
Tssr139654 16 96281011 to 96281026 15 + TSS region transcription start site region 139654
Tssr139655 16 96313725 to 96313727 2 + TSS region transcription start site region 139655
Cpgi8525 16 96315332 to 96315632 300 CpG island CpG island 8525
Tssr139656 16 96330065 to 96330068 3 + TSS region transcription start site region 139656
Gm41510 16 96352081 to 96355027 2946 + lncRNA gene predicted gene, 41510
Cpgi8526 16 96357950 to 96358136 186 CpG island CpG island 8526
Tssr139657 16 96361654 to 96361665 11 + TSS region transcription start site region 139657
Igsf5 16 96361668 to 96422121 60453 + protein coding gene immunoglobulin superfamily, member 5
Tssr139658 16 96361711 to 96361722 11 + TSS region transcription start site region 139658
Tssr139659 16 96361728 to 96361740 12 + TSS region transcription start site region 139659
Tssr139660 16 96361749 to 96361801 52 + TSS region transcription start site region 139660
Gm49948 16 96361794 to 96525580 163786 + protein coding gene predicted gene, 49948
Tssr139661 16 96361805 to 96361816 11 + TSS region transcription start site region 139661