Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:96059369-96129554

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25 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Brwd1 16 95992089 to 96082428 90339 - protein coding gene bromodomain and WD repeat domain containing 1
D16Jhu56 16 96062177 to 96062514 337 DNA segment DNA segment, Chr 16, Johns Hopkins University 56
D16Jhu59 16 96062293 to 96062498 205 DNA segment DNA segment, Chr 16, Johns Hopkins University 59
Tssr142276 16 96064446 to 96064450 4 - TSS region transcription start site region 142276
Tssr142277 16 96068008 to 96068011 3 - TSS region transcription start site region 142277
D16Jhu57 16 96080275 to 96080402 127 DNA segment DNA segment, Chr 16, Johns Hopkins University 57
Cpgi8516 16 96081294 to 96083503 2209 CpG island CpG island 8516
Tssr142278 16 96082363 to 96082374 11 - TSS region transcription start site region 142278
Tssr142279 16 96082389 to 96082481 92 - TSS region transcription start site region 142279
Tssr142280 16 96082513 to 96082573 60 - TSS region transcription start site region 142280
1700093J21Rik 16 96082676 to 96089070 6394 + bidirectional promoter lncRNA gene RIKEN cDNA 1700093J21 gene
Tssr142281 16 96082695 to 96082709 14 - TSS region transcription start site region 142281
Tssr142282 16 96082729 to 96082740 11 - TSS region transcription start site region 142282
D16Jhu58e 16 96088314 to 96088655 341 DNA segment DNA segment, Chr 16, Johns Hopkins University 58, expressed
Cpgi8517 16 96094369 to 96094554 185 CpG island CpG island 8517
Gm49953 16 96097204 to 96114862 17658 + lincRNA gene predicted gene, 49953
Hmgn1 16 96121588 to 96127725 6137 - protein coding gene high mobility group nucleosomal binding domain 1
Tssr142283 16 96124916 to 96124925 9 - TSS region transcription start site region 142283
Tssr142284 16 96124942 to 96124945 3 - TSS region transcription start site region 142284
Tssr142285 16 96124958 to 96124967 9 - TSS region transcription start site region 142285
Cpgi8518 16 96126932 to 96128408 1476 CpG island CpG island 8518
Tssr142286 16 96127464 to 96127496 32 - TSS region transcription start site region 142286
Tssr139630 16 96127543 to 96127554 11 + TSS region transcription start site region 139630
Tssr142287 16 96127689 to 96127736 47 - TSS region transcription start site region 142287
Tssr142288 16 96128016 to 96128031 15 - TSS region transcription start site region 142288