Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:95533789-95863795

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53 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Erg 16 95359169 to 95586593 227424 - protein coding gene ETS transcription factor
Cpgi8512 16 95585177 to 95586124 947 CpG island CpG island 8512
Tssr4971 16 95585553 to 95585560 7 - TSS region transcription start site region 4971
Tssr142261 16 95585568 to 95585588 20 - TSS region transcription start site region 142261
Tssr142262 16 95585625 to 95585643 18 - TSS region transcription start site region 142262
Tssr142263 16 95586585 to 95586595 10 - TSS region transcription start site region 142263
D16Jhu44 16 95593988 to 95594276 288 DNA segment DNA segment, Chr 16, Johns Hopkins University 44
Tssr4972 16 95612595 to 95612597 2 + TSS region transcription start site region 4972
D16Jhu45 16 95653138 to 95653309 171 DNA segment DNA segment, Chr 16, Johns Hopkins University 45
Gm31845 16 95664100 to 95668160 4060 - lncRNA gene predicted gene, 31845
D16Jhu46 16 95669214 to 95669469 255 DNA segment DNA segment, Chr 16, Johns Hopkins University 46
Gm31901 16 95676995 to 95683558 6563 + lncRNA gene predicted gene, 31901
Gm31989 16 95693544 to 95701934 8390 - lncRNA gene predicted gene, 31989
D16Mit219 16 95697133 to 95697246 113 DNA segment DNA Segment, Chr 16 Massachusetts Institute of Technology 219
Tssr139599 16 95698789 to 95698795 6 + TSS region transcription start site region 139599
Tssr139600 16 95700555 to 95700559 4 + TSS region transcription start site region 139600
Cpgi8513 16 95701727 to 95703106 1379 CpG island CpG island 8513
Tssr139601 16 95701979 to 95701991 12 + TSS region transcription start site region 139601
Tssr139602 16 95702044 to 95702094 50 + TSS region transcription start site region 139602
Tssr139603 16 95702099 to 95702110 11 + TSS region transcription start site region 139603
Tssr139604 16 95702398 to 95702435 37 + TSS region transcription start site region 139604
Ets2 16 95702407 to 95721049 18642 + protein coding gene E26 avian leukemia oncogene 2, 3' domain
Tssr139605 16 95702448 to 95702470 22 + TSS region transcription start site region 139605
Tssr139606 16 95703196 to 95703200 4 + TSS region transcription start site region 139606
Tssr139607 16 95703699 to 95703745 46 + TSS region transcription start site region 139607
Tssr139608 16 95703956 to 95703960 4 + TSS region transcription start site region 139608
Tssr139609 16 95709190 to 95709193 3 + TSS region transcription start site region 139609
Tssr142264 16 95715035 to 95715059 24 - TSS region transcription start site region 142264
Tssr139610 16 95715138 to 95715150 12 + TSS region transcription start site region 139610
D16Jhu47 16 95718057 to 95718366 309 DNA segment DNA segment, Chr 16, Johns Hopkins University 47
Tssr139611 16 95718986 to 95718992 6 + TSS region transcription start site region 139611
Tssr139612 16 95719850 to 95719867 17 + TSS region transcription start site region 139612
Tssr139613 16 95719913 to 95719926 13 + TSS region transcription start site region 139613
Tssr142265 16 95728916 to 95728962 46 - TSS region transcription start site region 142265
D16Mit20 16 95743386 to 95743584 198 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 20
Tssr142266 16 95749270 to 95749280 10 - TSS region transcription start site region 142266
Tssr142267 16 95750383 to 95750398 15 - TSS region transcription start site region 142267
Gm6599 16 95754300 to 95754707 407 + pseudogene predicted gene 6599
Gm37259 16 95759836 to 95760684 848 + unclassified gene predicted gene, 37259
Gm32130 16 95764229 to 95802348 38119 - lncRNA gene predicted gene, 32130
Tssr142268 16 95769120 to 95769123 3 - TSS region transcription start site region 142268
Tssr139614 16 95769188 to 95769199 11 + TSS region transcription start site region 139614
Tssr139615 16 95769217 to 95769227 10 + TSS region transcription start site region 139615
Tssr139616 16 95769929 to 95769943 14 + TSS region transcription start site region 139616
Tssr139617 16 95769986 to 95770010 24 + TSS region transcription start site region 139617
Gm41509 16 95797797 to 95805772 7975 + lncRNA gene predicted gene, 41509
Cpgi8514 16 95798155 to 95798480 325 CpG island CpG island 8514
2810404F17Rik 16 95806029 to 95808317 2288 - lincRNA gene RIKEN cDNA 2810404F17 gene
Tssr142269 16 95808719 to 95808722 3 - TSS region transcription start site region 142269
Tssr139618 16 95824879 to 95824896 17 + TSS region transcription start site region 139618
1600002D24Rik 16 95831123 to 95929077 97954 - lincRNA gene RIKEN cDNA 1600002D24 gene
Tssr139619 16 95831842 to 95831852 10 + TSS region transcription start site region 139619
D16Jhu48 16 95846228 to 95846382 154 DNA segment DNA segment, Chr 16, Johns Hopkins University 48