Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:95425177-95746124

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43 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Erg 16 95359169 to 95586593 227424 - protein coding gene ETS transcription factor
Tssr4969 16 95454989 to 95455026 37 + TSS region transcription start site region 4969
Tssr139598 16 95455137 to 95455145 8 + TSS region transcription start site region 139598
Tssr142258 16 95459017 to 95459023 6 - TSS region transcription start site region 142258
Tssr142259 16 95459059 to 95459098 39 - TSS region transcription start site region 142259
Tssr142260 16 95459282 to 95459384 102 - TSS region transcription start site region 142260
Tssr4970 16 95464593 to 95464613 20 - TSS region transcription start site region 4970
D16Jhu41 16 95479430 to 95479646 216 DNA segment DNA segment, Chr 16, Johns Hopkins University 41
D16Jhu42 16 95501693 to 95502084 391 DNA segment DNA segment, Chr 16, Johns Hopkins University 42
Cpgi8512 16 95585177 to 95586124 947 CpG island CpG island 8512
Tssr4971 16 95585553 to 95585560 7 - TSS region transcription start site region 4971
Tssr142261 16 95585568 to 95585588 20 - TSS region transcription start site region 142261
Tssr142262 16 95585625 to 95585643 18 - TSS region transcription start site region 142262
Tssr142263 16 95586585 to 95586595 10 - TSS region transcription start site region 142263
D16Jhu44 16 95593988 to 95594276 288 DNA segment DNA segment, Chr 16, Johns Hopkins University 44
Tssr4972 16 95612595 to 95612597 2 + TSS region transcription start site region 4972
D16Jhu45 16 95653138 to 95653309 171 DNA segment DNA segment, Chr 16, Johns Hopkins University 45
Gm31845 16 95664100 to 95668160 4060 - lncRNA gene predicted gene, 31845
D16Jhu46 16 95669214 to 95669469 255 DNA segment DNA segment, Chr 16, Johns Hopkins University 46
Gm31901 16 95676995 to 95683558 6563 + lncRNA gene predicted gene, 31901
Gm31989 16 95693544 to 95701934 8390 - lncRNA gene predicted gene, 31989
D16Mit219 16 95697133 to 95697246 113 DNA segment DNA Segment, Chr 16 Massachusetts Institute of Technology 219
Tssr139599 16 95698789 to 95698795 6 + TSS region transcription start site region 139599
Tssr139600 16 95700555 to 95700559 4 + TSS region transcription start site region 139600
Cpgi8513 16 95701727 to 95703106 1379 CpG island CpG island 8513
Tssr139601 16 95701979 to 95701991 12 + TSS region transcription start site region 139601
Tssr139602 16 95702044 to 95702094 50 + TSS region transcription start site region 139602
Tssr139603 16 95702099 to 95702110 11 + TSS region transcription start site region 139603
Tssr139604 16 95702398 to 95702435 37 + TSS region transcription start site region 139604
Ets2 16 95702407 to 95721049 18642 + protein coding gene E26 avian leukemia oncogene 2, 3' domain
Tssr139605 16 95702448 to 95702470 22 + TSS region transcription start site region 139605
Tssr139606 16 95703196 to 95703200 4 + TSS region transcription start site region 139606
Tssr139607 16 95703699 to 95703745 46 + TSS region transcription start site region 139607
Tssr139608 16 95703956 to 95703960 4 + TSS region transcription start site region 139608
Tssr139609 16 95709190 to 95709193 3 + TSS region transcription start site region 139609
Tssr142264 16 95715035 to 95715059 24 - TSS region transcription start site region 142264
Tssr139610 16 95715138 to 95715150 12 + TSS region transcription start site region 139610
D16Jhu47 16 95718057 to 95718366 309 DNA segment DNA segment, Chr 16, Johns Hopkins University 47
Tssr139611 16 95718986 to 95718992 6 + TSS region transcription start site region 139611
Tssr139612 16 95719850 to 95719867 17 + TSS region transcription start site region 139612
Tssr139613 16 95719913 to 95719926 13 + TSS region transcription start site region 139613
Tssr142265 16 95728916 to 95728962 46 - TSS region transcription start site region 142265
D16Mit20 16 95743386 to 95743584 198 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 20