Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:94791370-95292017

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55 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Del(16Tiam1-Kcnj6)7Yey 16 89787111 to 94997696 5210585 chromosomal deletion deletion, Chr 16, Y Eugene Yu 7
Dp(16Tiam1-Kcnj6)6Yey 16 89787111 to 94997696 5210585 chromosomal duplication duplication, Chr 16, Y Eugene Yu 6
Kcnj6 16 94748683 to 94997696 249013 - protein coding gene potassium inwardly-rectifying channel, subfamily J, member 6
Cpgi8508 16 94798093 to 94798278 185 CpG island CpG island 8508
Tssr142237 16 94856682 to 94856697 15 - TSS region transcription start site region 142237
D16Ium52 16 94861552 to 94861922 370 DNA segment DNA segment, Chr 16, Indiana University Medical 52
Gm22745 16 94869464 to 94869533 69 + miRNA gene predicted gene, 22745
Tssr142238 16 94902292 to 94902295 3 - TSS region transcription start site region 142238
D16Jhu38 16 94910284 to 94910432 148 DNA segment DNA segment, Chr 16, Johns Hopkins University 38
Tssr142239 16 94918322 to 94918334 12 - TSS region transcription start site region 142239
Tssr142240 16 94918385 to 94918389 4 - TSS region transcription start site region 142240
Tssr139572 16 94969200 to 94969230 30 + TSS region transcription start site region 139572
Tssr139573 16 94969258 to 94969281 23 + TSS region transcription start site region 139573
Tssr139574 16 94969299 to 94969304 5 + TSS region transcription start site region 139574
Tssr139575 16 94984451 to 94984464 13 + TSS region transcription start site region 139575
Tssr142241 16 94994948 to 94994965 17 - TSS region transcription start site region 142241
Tssr142242 16 94995054 to 94995066 12 - TSS region transcription start site region 142242
Tssr142243 16 94995126 to 94995140 14 - TSS region transcription start site region 142243
Tssr142244 16 94995142 to 94995153 11 - TSS region transcription start site region 142244
Cpgi8509 16 94997113 to 94997986 873 CpG island CpG island 8509
Tssr142245 16 94997374 to 94997437 63 - TSS region transcription start site region 142245
Tssr142246 16 94997470 to 94997486 16 - TSS region transcription start site region 142246
Tssr142247 16 94997576 to 94997592 16 - TSS region transcription start site region 142247
Tssr142248 16 94997607 to 94997616 9 - TSS region transcription start site region 142248
Tssr142249 16 94997653 to 94997704 51 - TSS region transcription start site region 142249
Tssr142250 16 94997706 to 94997727 21 - TSS region transcription start site region 142250
Tssr142251 16 94997738 to 94997753 15 - TSS region transcription start site region 142251
Gm31407 16 94997996 to 95001278 3282 + lncRNA gene predicted gene, 31407
Tssr139576 16 95011063 to 95011066 3 + TSS region transcription start site region 139576
Gm7976 16 95016370 to 95067017 50647 + pseudogene predicted gene 7976
DXIum1 16 95030184 to 95030415 231 DNA segment DNA segment, Chr X, Indiana University Medical 1
Gm49641 16 95102404 to 95103196 792 + pseudogene predicted gene, 49641
Gm49642 16 95169838 to 95171510 1672 - unclassified gene predicted gene, 49642
Gm31641 16 95184537 to 95263333 78796 - antisense lncRNA gene predicted gene, 31641
D16Jhu39 16 95189479 to 95189895 416 DNA segment DNA segment, Chr 16, Johns Hopkins University 39
Gm31754 16 95240531 to 95250457 9926 + lncRNA gene predicted gene, 31754
Tssr139577 16 95241018 to 95241024 6 + TSS region transcription start site region 139577
Kcnj15 16 95257558 to 95300260 42702 + protein coding gene potassium inwardly-rectifying channel, subfamily J, member 15
Tssr139578 16 95257574 to 95257579 5 + TSS region transcription start site region 139578
Tssr139579 16 95257617 to 95257644 27 + TSS region transcription start site region 139579
Tssr139580 16 95257646 to 95257685 39 + TSS region transcription start site region 139580
Tssr139581 16 95257773 to 95257782 9 + TSS region transcription start site region 139581
Tssr139582 16 95258155 to 95258205 50 + TSS region transcription start site region 139582
Tssr139583 16 95258209 to 95258244 35 + TSS region transcription start site region 139583
Tssr139584 16 95258262 to 95258302 40 + TSS region transcription start site region 139584
Tssr139585 16 95258310 to 95258333 23 + TSS region transcription start site region 139585
Tssr139586 16 95258339 to 95258371 32 + TSS region transcription start site region 139586
Tssr139587 16 95258372 to 95258397 25 + TSS region transcription start site region 139587
Tssr142252 16 95259610 to 95259622 12 - TSS region transcription start site region 142252
Tssr142253 16 95259698 to 95259710 12 - TSS region transcription start site region 142253
Tssr139588 16 95278508 to 95278523 15 + TSS region transcription start site region 139588
Tssr139589 16 95278528 to 95278541 13 + TSS region transcription start site region 139589
Tssr139590 16 95278558 to 95278567 9 + TSS region transcription start site region 139590
Tssr139591 16 95279354 to 95279367 13 + TSS region transcription start site region 139591
Tssr142254 16 95290475 to 95290479 4 - TSS region transcription start site region 142254