Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:94747607-95247616

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42 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Dp(16Tiam1-Kcnj6)6Yey 16 89787111 to 94997696 5210585 chromosomal duplication duplication, Chr 16, Y Eugene Yu 6
Del(16Tiam1-Kcnj6)7Yey 16 89787111 to 94997696 5210585 chromosomal deletion deletion, Chr 16, Y Eugene Yu 7
Kcnj6 16 94748683 to 94997696 249013 - protein coding gene potassium inwardly-rectifying channel, subfamily J, member 6
6530402D11Rik 16 94749774 to 94751034 1260 protein coding gene RIKEN cDNA 6530402D11 gene
Gm41505 16 94752728 to 94753436 708 + antisense lncRNA gene predicted gene, 41505
Tssr4968 16 94760925 to 94760926 1 - TSS region transcription start site region 4968
Tssr139571 16 94780155 to 94780167 12 + TSS region transcription start site region 139571
Cpgi8507 16 94788172 to 94788492 320 CpG island CpG island 8507
Cpgi8508 16 94798093 to 94798278 185 CpG island CpG island 8508
Tssr142237 16 94856682 to 94856697 15 - TSS region transcription start site region 142237
D16Ium52 16 94861552 to 94861922 370 DNA segment DNA segment, Chr 16, Indiana University Medical 52
Gm22745 16 94869464 to 94869533 69 + miRNA gene predicted gene, 22745
Tssr142238 16 94902292 to 94902295 3 - TSS region transcription start site region 142238
D16Jhu38 16 94910284 to 94910432 148 DNA segment DNA segment, Chr 16, Johns Hopkins University 38
Tssr142239 16 94918322 to 94918334 12 - TSS region transcription start site region 142239
Tssr142240 16 94918385 to 94918389 4 - TSS region transcription start site region 142240
Tssr139572 16 94969200 to 94969230 30 + TSS region transcription start site region 139572
Tssr139573 16 94969258 to 94969281 23 + TSS region transcription start site region 139573
Tssr139574 16 94969299 to 94969304 5 + TSS region transcription start site region 139574
Tssr139575 16 94984451 to 94984464 13 + TSS region transcription start site region 139575
Tssr142241 16 94994948 to 94994965 17 - TSS region transcription start site region 142241
Tssr142242 16 94995054 to 94995066 12 - TSS region transcription start site region 142242
Tssr142243 16 94995126 to 94995140 14 - TSS region transcription start site region 142243
Tssr142244 16 94995142 to 94995153 11 - TSS region transcription start site region 142244
Cpgi8509 16 94997113 to 94997986 873 CpG island CpG island 8509
Tssr142245 16 94997374 to 94997437 63 - TSS region transcription start site region 142245
Tssr142246 16 94997470 to 94997486 16 - TSS region transcription start site region 142246
Tssr142247 16 94997576 to 94997592 16 - TSS region transcription start site region 142247
Tssr142248 16 94997607 to 94997616 9 - TSS region transcription start site region 142248
Tssr142249 16 94997653 to 94997704 51 - TSS region transcription start site region 142249
Tssr142250 16 94997706 to 94997727 21 - TSS region transcription start site region 142250
Tssr142251 16 94997738 to 94997753 15 - TSS region transcription start site region 142251
Gm31407 16 94997996 to 95001278 3282 + lncRNA gene predicted gene, 31407
Tssr139576 16 95011063 to 95011066 3 + TSS region transcription start site region 139576
Gm7976 16 95016370 to 95067017 50647 + pseudogene predicted gene 7976
DXIum1 16 95030184 to 95030415 231 DNA segment DNA segment, Chr X, Indiana University Medical 1
Gm49641 16 95102404 to 95103196 792 + pseudogene predicted gene, 49641
Gm49642 16 95169838 to 95171510 1672 - unclassified gene predicted gene, 49642
Gm31641 16 95184537 to 95263333 78796 - antisense lncRNA gene predicted gene, 31641
D16Jhu39 16 95189479 to 95189895 416 DNA segment DNA segment, Chr 16, Johns Hopkins University 39
Gm31754 16 95240531 to 95250457 9926 + lncRNA gene predicted gene, 31754
Tssr139577 16 95241018 to 95241024 6 + TSS region transcription start site region 139577