MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 16:94641880-94801900

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Dyrk1a	16	94570010 to 94695517	125507	+	protein coding gene	dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1a
Tssr139565	16	94694212 to 94694251	39	+	TSS region	transcription start site region 139565
Gm41504	16	94712559 to 94713903	1344	-	lncRNA gene	predicted gene, 41504
Cpgi8505	16	94713600 to 94714111	511		CpG island	CpG island 8505
Tssr139566	16	94721880 to 94721900	20	+	TSS region	transcription start site region 139566
Tssr139567	16	94721955 to 94721968	13	+	TSS region	transcription start site region 139567
Tssr139568	16	94721980 to 94721991	11	+	TSS region	transcription start site region 139568
Gm41507	16	94723328 to 94725397	2069	-	lncRNA gene	predicted gene, 41507
Cpgi8506	16	94724201 to 94725276	1075		CpG island	CpG island 8506
Tssr139569	16	94724486 to 94724505	19	+	TSS region	transcription start site region 139569
Tssr139570	16	94732125 to 94732127	2	+	TSS region	transcription start site region 139570
Kcnj6	16	94748683 to 94997696	249013	-	protein coding gene	potassium inwardly-rectifying channel, subfamily J, member 6
6530402D11Rik	16	94749774 to 94751034	1260		protein coding gene	RIKEN cDNA 6530402D11 gene
Gm41505	16	94752728 to 94753436	708	+	antisense lncRNA gene	predicted gene, 41505
Tssr4968	16	94760925 to 94760926	1	-	TSS region	transcription start site region 4968
Tssr139571	16	94780155 to 94780167	12	+	TSS region	transcription start site region 139571
Cpgi8507	16	94788172 to 94788492	320		CpG island	CpG island 8507
Cpgi8508	16	94798093 to 94798278	185		CpG island	CpG island 8508