Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:94330083-94520107

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31 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ripply3 16 94328422 to 94336935 8513 + protein coding gene ripply transcriptional repressor 3
Gm31259 16 94338908 to 94343807 4899 + lncRNA gene predicted gene, 31259
D16Jhu36 16 94350844 to 94351065 221 DNA segment DNA segment, Chr 16, Johns Hopkins University 36
Pigp 16 94358763 to 94371015 12252 - protein coding gene phosphatidylinositol glycan anchor biosynthesis, class P
Gm15310 16 94358941 to 94359312 371 - pseudogene predicted gene 15310
Cpgi8502 16 94370085 to 94371834 1749 CpG island CpG island 8502
Tssr142225 16 94370450 to 94370553 103 - TSS region transcription start site region 142225
Ttc3 16 94370620 to 94469222 98602 + protein coding gene tetratricopeptide repeat domain 3
Tssr142226 16 94370647 to 94370694 47 - TSS region transcription start site region 142226
Tssr142227 16 94370695 to 94370748 53 - TSS region transcription start site region 142227
Tssr139543 16 94370731 to 94370784 53 + TSS region transcription start site region 139543
Tssr139544 16 94370786 to 94370807 21 + TSS region transcription start site region 139544
Tssr142228 16 94370967 to 94370990 23 - TSS region transcription start site region 142228
Tssr142229 16 94370994 to 94371019 25 - TSS region transcription start site region 142229
Tssr142230 16 94371832 to 94371848 16 - TSS region transcription start site region 142230
D16Jhu37 16 94374912 to 94375134 222 DNA segment DNA segment, Chr 16, Johns Hopkins University 37
Tssr139545 16 94410823 to 94410861 38 + TSS region transcription start site region 139545
Tssr139546 16 94420301 to 94420320 19 + TSS region transcription start site region 139546
Tssr139547 16 94425083 to 94425107 24 + TSS region transcription start site region 139547
Tssr139548 16 94426184 to 94426197 13 + TSS region transcription start site region 139548
Gm23692 16 94429073 to 94429232 159 + snRNA gene predicted gene, 23692
Tssr139549 16 94442581 to 94442599 18 + TSS region transcription start site region 139549
Tssr139550 16 94448108 to 94448119 11 + TSS region transcription start site region 139550
Tssr139551 16 94454411 to 94454452 41 + TSS region transcription start site region 139551
Tssr139552 16 94454472 to 94454484 12 + TSS region transcription start site region 139552
Tssr139553 16 94459953 to 94459966 13 + TSS region transcription start site region 139553
Tssr139554 16 94468497 to 94468501 4 + TSS region transcription start site region 139554
Gm31323 16 94488777 to 94522117 33340 + antisense lncRNA gene predicted gene, 31323
Vps26c 16 94497724 to 94526629 28905 - protein coding gene VPS26 endosomal protein sorting factor C
Tssr142231 16 94498647 to 94498677 30 - TSS region transcription start site region 142231
Tssr139555 16 94502463 to 94502470 7 + TSS region transcription start site region 139555