Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:93787507-93937823

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35 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Dop1b 16 93711907 to 93810588 98681 + protein coding gene DOP1 leucine zipper like protein B
Tssr139523 16 93788690 to 93788711 21 + TSS region transcription start site region 139523
2310043M15Rik 16 93793238 to 93795206 1968 - antisense lncRNA gene RIKEN cDNA 2310043M15 gene
Tssr142203 16 93794835 to 93794845 10 - TSS region transcription start site region 142203
Tssr142204 16 93794882 to 93794918 36 - TSS region transcription start site region 142204
Tssr142205 16 93795024 to 93795065 41 - TSS region transcription start site region 142205
D16Jhu30 16 93798788 to 93798962 174 DNA segment DNA segment, Chr 16, Johns Hopkins University 30
Tssr139524 16 93798855 to 93798904 49 + TSS region transcription start site region 139524
Gm30881 16 93808540 to 93833019 24479 - antisense lncRNA gene predicted gene, 30881
Tssr139525 16 93809427 to 93809443 16 + TSS region transcription start site region 139525
Tssr142206 16 93816388 to 93816404 16 - TSS region transcription start site region 142206
Cpgi8488 16 93831816 to 93833123 1307 CpG island CpG island 8488
Morc3 16 93832121 to 93876073 43952 + protein coding gene microrchidia 3
Tssr139526 16 93832221 to 93832308 87 + TSS region transcription start site region 139526
Tssr142207 16 93833003 to 93833049 46 - TSS region transcription start site region 142207
Tssr139527 16 93833271 to 93833277 6 + TSS region transcription start site region 139527
D16Jhu31e 16 93862507 to 93862823 316 DNA segment DNA segment, Chr 16, Johns Hopkins University 31, expressed
Tssr139528 16 93864447 to 93864451 4 + TSS region transcription start site region 139528
2610034B04Rik 16 93882994 to 93884460 1466 unclassified gene RIKEN cDNA 2610034B04 gene
Cpgi8489 16 93883450 to 93884721 1271 CpG island CpG island 8489
Tssr139529 16 93883895 to 93883954 59 + TSS region transcription start site region 139529
Chaf1b 16 93883901 to 93906115 22214 + protein coding gene chromatin assembly factor 1, subunit B (p60)
Tssr139530 16 93883958 to 93883974 16 + TSS region transcription start site region 139530
Gm49617 16 93888734 to 93890147 1413 + sense intronic lncRNA gene predicted gene, 49617
Tssr142208 16 93912203 to 93912216 13 - TSS region transcription start site region 142208
Tssr139531 16 93912359 to 93912403 44 + TSS region transcription start site region 139531
Tssr142209 16 93914334 to 93914357 23 - TSS region transcription start site region 142209
Cldn14 16 93919031 to 94008837 89806 - protein coding gene claudin 14
Cpgi8490 16 93919205 to 93919874 669 CpG island CpG island 8490
Tssr139532 16 93929361 to 93929367 6 + TSS region transcription start site region 139532
Tssr142210 16 93929464 to 93929475 11 - TSS region transcription start site region 142210
Tssr142211 16 93929483 to 93929505 22 - TSS region transcription start site region 142211
Tssr142212 16 93929512 to 93929528 16 - TSS region transcription start site region 142212
Gm31012 16 93929656 to 93957722 28066 + lncRNA gene predicted gene, 31012
Cpgi8491 16 93934209 to 93934481 272 CpG island CpG island 8491