MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 16:93655239-93725357

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Tssr139511	16	93676421 to 93676424	3	+	TSS region	transcription start site region 139511
Cpgi8484	16	93682692 to 93684102	1410		CpG island	CpG island 8484
Tssr139512	16	93683003 to 93683024	21	+	TSS region	transcription start site region 139512
Tssr139513	16	93683184 to 93683223	39	+	TSS region	transcription start site region 139513
Cbr3	16	93683219 to 93690991	7772	+	protein coding gene	carbonyl reductase 3
Tssr139514	16	93683229 to 93683249	20	+	TSS region	transcription start site region 139514
D16Jhu28	16	93688325 to 93688561	236		DNA segment	DNA segment, Chr 16, Johns Hopkins University 28
D16Jhu29	16	93690239 to 93690357	118		DNA segment	DNA segment, Chr 16, Johns Hopkins University 29
Cpgi8485	16	93690505 to 93690679	174		CpG island	CpG island 8485
Gm41501	16	93705336 to 93710145	4809	+	lncRNA gene	predicted gene, 41501
Tssr142199	16	93711267 to 93711270	3	-	TSS region	transcription start site region 142199
Cpgi8486	16	93711424 to 93712464	1040		CpG island	CpG island 8486
Dop1b	16	93711907 to 93810588	98681	+	protein coding gene	DOP1 leucine zipper like protein B
Tssr139515	16	93711912 to 93711921	9	+	TSS region	transcription start site region 139515
Tssr139516	16	93711924 to 93711937	13	+	TSS region	transcription start site region 139516
Tssr139517	16	93711952 to 93712008	56	+	TSS region	transcription start site region 139517
Tssr142200	16	93712424 to 93712427	3	-	TSS region	transcription start site region 142200
Tssr142201	16	93721899 to 93721905	6	-	TSS region	transcription start site region 142201