Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:93616912-93806921

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40 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr139510 16 93628025 to 93628043 18 + TSS region transcription start site region 139510
Cpgi8482 16 93628067 to 93628381 314 CpG island CpG island 8482
Gm5678 16 93628097 to 93630451 2354 + pseudogene predicted gene 5678
Cpgi8483 16 93653025 to 93653369 344 CpG island CpG island 8483
Gm45384 16 93653088 to 93653364 276 + pseudogene predicted gene 45384
Gm22344 16 93654324 to 93654601 277 + unclassified non-coding RNA gene predicted gene, 22344
Tssr139511 16 93676421 to 93676424 3 + TSS region transcription start site region 139511
Cpgi8484 16 93682692 to 93684102 1410 CpG island CpG island 8484
Tssr139512 16 93683003 to 93683024 21 + TSS region transcription start site region 139512
Tssr139513 16 93683184 to 93683223 39 + TSS region transcription start site region 139513
Cbr3 16 93683219 to 93690991 7772 + protein coding gene carbonyl reductase 3
Tssr139514 16 93683229 to 93683249 20 + TSS region transcription start site region 139514
D16Jhu28 16 93688325 to 93688561 236 DNA segment DNA segment, Chr 16, Johns Hopkins University 28
D16Jhu29 16 93690239 to 93690357 118 DNA segment DNA segment, Chr 16, Johns Hopkins University 29
Cpgi8485 16 93690505 to 93690679 174 CpG island CpG island 8485
Gm41501 16 93705336 to 93710145 4809 + lncRNA gene predicted gene, 41501
Tssr142199 16 93711267 to 93711270 3 - TSS region transcription start site region 142199
Cpgi8486 16 93711424 to 93712464 1040 CpG island CpG island 8486
Dop1b 16 93711907 to 93810588 98681 + protein coding gene DOP1 leucine zipper like protein B
Tssr139515 16 93711912 to 93711921 9 + TSS region transcription start site region 139515
Tssr139516 16 93711924 to 93711937 13 + TSS region transcription start site region 139516
Tssr139517 16 93711952 to 93712008 56 + TSS region transcription start site region 139517
Tssr142200 16 93712424 to 93712427 3 - TSS region transcription start site region 142200
Tssr142201 16 93721899 to 93721905 6 - TSS region transcription start site region 142201
Tssr4966 16 93730114 to 93730145 31 + TSS region transcription start site region 4966
D16Mit204 16 93742795 to 93742927 132 DNA segment DNA Segment, Chr 16, Massachusetts Institute of Technology 204
Tssr142202 16 93751942 to 93751950 8 - TSS region transcription start site region 142202
Cpgi8487 16 93769775 to 93769926 151 CpG island CpG island 8487
Tssr139518 16 93776709 to 93776723 14 + TSS region transcription start site region 139518
Tssr139519 16 93777208 to 93777219 11 + TSS region transcription start site region 139519
Tssr139520 16 93777241 to 93777265 24 + TSS region transcription start site region 139520
Tssr139521 16 93778722 to 93778736 14 + TSS region transcription start site region 139521
Tssr139522 16 93780945 to 93780980 35 + TSS region transcription start site region 139522
Tssr139523 16 93788690 to 93788711 21 + TSS region transcription start site region 139523
2310043M15Rik 16 93793238 to 93795206 1968 - antisense lncRNA gene RIKEN cDNA 2310043M15 gene
Tssr142203 16 93794835 to 93794845 10 - TSS region transcription start site region 142203
Tssr142204 16 93794882 to 93794918 36 - TSS region transcription start site region 142204
Tssr142205 16 93795024 to 93795065 41 - TSS region transcription start site region 142205
D16Jhu30 16 93798788 to 93798962 174 DNA segment DNA segment, Chr 16, Johns Hopkins University 30
Tssr139524 16 93798855 to 93798904 49 + TSS region transcription start site region 139524