Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:93432408-93632427

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30 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
1700029J03Rik 16 93396815 to 93458872 62057 - lincRNA gene RIKEN cDNA 1700029J03 gene
D16Jhu24 16 93451624 to 93451835 211 DNA segment DNA segment, Chr 16, Johns Hopkins University 24
Cpgi8478 16 93458314 to 93458570 256 CpG island CpG island 8478
Gm30695 16 93472167 to 93487074 14907 - lincRNA gene predicted gene, 30695
Cpgi8479 16 93489460 to 93489970 510 CpG island CpG island 8479
Tssr142194 16 93490287 to 93490294 7 - TSS region transcription start site region 142194
D16Jhu25 16 93527179 to 93527374 195 DNA segment DNA segment, Chr 16, Johns Hopkins University 25
Gm49725 16 93532388 to 93534042 1654 + lincRNA gene predicted gene, 49725
Tssr139504 16 93532408 to 93532427 19 + TSS region transcription start site region 139504
Tssr4965 16 93547775 to 93547779 4 + TSS region transcription start site region 4965
Setd4 16 93583457 to 93604063 20606 - protein coding gene SET domain containing 4
Tssr142195 16 93586561 to 93586594 33 - TSS region transcription start site region 142195
Tssr139505 16 93591159 to 93591185 26 + TSS region transcription start site region 139505
Gm49961 16 93591401 to 93597760 6359 + antisense lncRNA gene predicted gene, 49961
Tssr142196 16 93598360 to 93598361 1 - TSS region transcription start site region 142196
Cpgi8480 16 93603514 to 93604290 776 CpG island CpG island 8480
Gm9510 16 93603762 to 93604967 1205 unclassified gene predicted gene 9510
Tssr139506 16 93603831 to 93603847 16 + TSS region transcription start site region 139506
Tssr142197 16 93604040 to 93604077 37 - TSS region transcription start site region 142197
Tssr142198 16 93604783 to 93604798 15 - TSS region transcription start site region 142198
Cpgi8481 16 93607695 to 93608419 724 CpG island CpG island 8481
Tssr139507 16 93607816 to 93607829 13 + TSS region transcription start site region 139507
Tssr139508 16 93607831 to 93607896 65 + TSS region transcription start site region 139508
Dp(16Cbr1-Fam3b)1Rhr 16 93607837 to 97504936 3897099 chromosomal duplication duplication, Chr 16, H R Reeves 1
Del(16Cbr1-Fam3b)1Rhr 16 93607837 to 97504936 3897099 cytogenetic marker deletion, Chr16, R H Reeves 1
Cbr1 16 93607837 to 93610349 2512 + protein coding gene carbonyl reductase 1
Tssr139509 16 93607904 to 93607919 15 + TSS region transcription start site region 139509
Tssr139510 16 93628025 to 93628043 18 + TSS region transcription start site region 139510
Cpgi8482 16 93628067 to 93628381 314 CpG island CpG island 8482
Gm5678 16 93628097 to 93630451 2354 + pseudogene predicted gene 5678