Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:93261815-93593872

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27 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm30588 16 93262363 to 93263467 1104 + lncRNA gene predicted gene, 30588
D16Jhu21 16 93292910 to 93293137 227 DNA segment DNA segment, Chr 16, Johns Hopkins University 21
1810053B23Rik 16 93343716 to 93359543 15827 - lncRNA gene RIKEN cDNA 1810053B23 gene
D16Jhu22 16 93352647 to 93352812 165 DNA segment DNA segment, Chr 16, Johns Hopkins University 22
Tssr142190 16 93354073 to 93354086 13 - TSS region transcription start site region 142190
Tssr142191 16 93358710 to 93358730 20 - TSS region transcription start site region 142191
Tssr142192 16 93359536 to 93359550 14 - TSS region transcription start site region 142192
Tssr142193 16 93365319 to 93365343 24 - TSS region transcription start site region 142193
1810044K17Rik 16 93368239 to 93369029 790 + lincRNA gene RIKEN cDNA 1810044K17 gene
Tssr139502 16 93368253 to 93368267 14 + TSS region transcription start site region 139502
Tssr139503 16 93368414 to 93368431 17 + TSS region transcription start site region 139503
Mir802 16 93369720 to 93369816 96 + miRNA gene microRNA 802
1700029J03Rik 16 93396815 to 93458872 62057 - lincRNA gene RIKEN cDNA 1700029J03 gene
Tssr4964 16 93424276 to 93424280 4 + TSS region transcription start site region 4964
D16Jhu24 16 93451624 to 93451835 211 DNA segment DNA segment, Chr 16, Johns Hopkins University 24
Cpgi8478 16 93458314 to 93458570 256 CpG island CpG island 8478
Gm30695 16 93472167 to 93487074 14907 - lincRNA gene predicted gene, 30695
Cpgi8479 16 93489460 to 93489970 510 CpG island CpG island 8479
Tssr142194 16 93490287 to 93490294 7 - TSS region transcription start site region 142194
D16Jhu25 16 93527179 to 93527374 195 DNA segment DNA segment, Chr 16, Johns Hopkins University 25
Gm49725 16 93532388 to 93534042 1654 + lincRNA gene predicted gene, 49725
Tssr139504 16 93532408 to 93532427 19 + TSS region transcription start site region 139504
Tssr4965 16 93547775 to 93547779 4 + TSS region transcription start site region 4965
Setd4 16 93583457 to 93604063 20606 - protein coding gene SET domain containing 4
Tssr142195 16 93586561 to 93586594 33 - TSS region transcription start site region 142195
Tssr139505 16 93591159 to 93591185 26 + TSS region transcription start site region 139505
Gm49961 16 93591401 to 93597760 6359 + antisense lncRNA gene predicted gene, 49961