Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:92807792-93447805

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67 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Del(16App-Runx1)5Yah 16 84952666 to 92826074 7873408 chromosomal deletion deletion, Chr 16, Yann Herault 5
Runx1 16 92601466 to 92826074 224608 - protein coding gene runt related transcription factor 1
Tssr142161 16 92808965 to 92808981 16 - TSS region transcription start site region 142161
Tssr142162 16 92817030 to 92817055 25 - TSS region transcription start site region 142162
Tssr142163 16 92817926 to 92817940 14 - TSS region transcription start site region 142163
Tssr139489 16 92818803 to 92818814 11 + TSS region transcription start site region 139489
Tssr142164 16 92822064 to 92822069 5 - TSS region transcription start site region 142164
Tssr139490 16 92823839 to 92823853 14 + TSS region transcription start site region 139490
Tssr142165 16 92824476 to 92824507 31 - TSS region transcription start site region 142165
Tssr139491 16 92824599 to 92824613 14 + TSS region transcription start site region 139491
Tssr139492 16 92824631 to 92824639 8 + TSS region transcription start site region 139492
Tssr142166 16 92825535 to 92825548 13 - TSS region transcription start site region 142166
Tssr142167 16 92825561 to 92825572 11 - TSS region transcription start site region 142167
Tssr142168 16 92825605 to 92825641 36 - TSS region transcription start site region 142168
Tssr142169 16 92825751 to 92825766 15 - TSS region transcription start site region 142169
Tssr142170 16 92825771 to 92825782 11 - TSS region transcription start site region 142170
Tssr142171 16 92825791 to 92825821 30 - TSS region transcription start site region 142171
Tssr142172 16 92825835 to 92825846 11 - TSS region transcription start site region 142172
Tssr142173 16 92825922 to 92825931 9 - TSS region transcription start site region 142173
Tssr142174 16 92825935 to 92825946 11 - TSS region transcription start site region 142174
Tssr142175 16 92825987 to 92826000 13 - TSS region transcription start site region 142175
Tssr142176 16 92826004 to 92826080 76 - TSS region transcription start site region 142176
Tssr142177 16 92826093 to 92826102 9 - TSS region transcription start site region 142177
Tssr4962 16 92831274 to 92831290 16 - TSS region transcription start site region 4962
Gm49723 16 92861877 to 92874472 12595 + lincRNA gene predicted gene, 49723
Tssr139493 16 92946799 to 92946823 24 + TSS region transcription start site region 139493
Tssr139494 16 92946832 to 92946839 7 + TSS region transcription start site region 139494
Gm41499 16 92956959 to 92959120 2161 + lncRNA gene predicted gene, 41499
Tssr139495 16 92995465 to 92995508 43 + TSS region transcription start site region 139495
Tssr139496 16 92995774 to 92995779 5 + TSS region transcription start site region 139496
Tssr4963 16 93002750 to 93002755 5 + TSS region transcription start site region 4963
Gm28003 16 93072755 to 93072822 67 + miRNA gene predicted gene, 28003
Tssr139497 16 93104146 to 93104150 4 + TSS region transcription start site region 139497
Tssr142178 16 93123092 to 93123096 4 - TSS region transcription start site region 142178
Tssr139498 16 93124007 to 93124029 22 + TSS region transcription start site region 139498
Tssr142179 16 93127754 to 93127775 21 - TSS region transcription start site region 142179
Tssr142180 16 93127792 to 93127805 13 - TSS region transcription start site region 142180
Gm30474 16 93127826 to 93132040 4214 - lncRNA gene predicted gene, 30474
Tssr142181 16 93127921 to 93127934 13 - TSS region transcription start site region 142181
D16Mit86 16 93134067 to 93134194 127 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 86
Tssr142182 16 93142059 to 93142072 13 - TSS region transcription start site region 142182
Tssr142183 16 93142078 to 93142092 14 - TSS region transcription start site region 142183
Tssr142184 16 93142151 to 93142163 12 - TSS region transcription start site region 142184
Tssr142185 16 93142192 to 93142254 62 - TSS region transcription start site region 142185
Tssr142186 16 93142263 to 93142275 12 - TSS region transcription start site region 142186
Tssr139499 16 93144328 to 93144340 12 + TSS region transcription start site region 139499
Tssr142187 16 93147699 to 93147710 11 - TSS region transcription start site region 142187
Tssr142188 16 93150440 to 93150444 4 - TSS region transcription start site region 142188
Tssr139500 16 93153054 to 93153070 16 + TSS region transcription start site region 139500
Tssr139501 16 93153299 to 93153333 34 + TSS region transcription start site region 139501
Tssr142189 16 93154058 to 93154071 13 - TSS region transcription start site region 142189
Gm30530 16 93184202 to 93193795 9593 - lncRNA gene predicted gene, 30530
41.MHAa75d5.seq 16 93218782 to 93218944 162 DNA segment DNA segment, Chr 16, 41.MHAa75d5.seq
Gm30588 16 93262363 to 93263467 1104 + lncRNA gene predicted gene, 30588
D16Jhu21 16 93292910 to 93293137 227 DNA segment DNA segment, Chr 16, Johns Hopkins University 21
1810053B23Rik 16 93343716 to 93359543 15827 - lncRNA gene RIKEN cDNA 1810053B23 gene
D16Jhu22 16 93352647 to 93352812 165 DNA segment DNA segment, Chr 16, Johns Hopkins University 22
Tssr142190 16 93354073 to 93354086 13 - TSS region transcription start site region 142190
Tssr142191 16 93358710 to 93358730 20 - TSS region transcription start site region 142191
Tssr142192 16 93359536 to 93359550 14 - TSS region transcription start site region 142192
Tssr142193 16 93365319 to 93365343 24 - TSS region transcription start site region 142193
1810044K17Rik 16 93368239 to 93369029 790 + lincRNA gene RIKEN cDNA 1810044K17 gene
Tssr139502 16 93368253 to 93368267 14 + TSS region transcription start site region 139502
Tssr139503 16 93368414 to 93368431 17 + TSS region transcription start site region 139503
Mir802 16 93369720 to 93369816 96 + miRNA gene microRNA 802
1700029J03Rik 16 93396815 to 93458872 62057 - lincRNA gene RIKEN cDNA 1700029J03 gene
Tssr4964 16 93424276 to 93424280 4 + TSS region transcription start site region 4964