Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:92801799-93091823

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33 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Del(16App-Runx1)5Yah 16 84952666 to 92826074 7873408 chromosomal deletion deletion, Chr 16, Yann Herault 5
Runx1 16 92601466 to 92826074 224608 - protein coding gene runt related transcription factor 1
Cpgi8477 16 92801635 to 92801822 187 CpG island CpG island 8477
Tssr142161 16 92808965 to 92808981 16 - TSS region transcription start site region 142161
Tssr142162 16 92817030 to 92817055 25 - TSS region transcription start site region 142162
Tssr142163 16 92817926 to 92817940 14 - TSS region transcription start site region 142163
Tssr139489 16 92818803 to 92818814 11 + TSS region transcription start site region 139489
Tssr142164 16 92822064 to 92822069 5 - TSS region transcription start site region 142164
Tssr139490 16 92823839 to 92823853 14 + TSS region transcription start site region 139490
Tssr142165 16 92824476 to 92824507 31 - TSS region transcription start site region 142165
Tssr139491 16 92824599 to 92824613 14 + TSS region transcription start site region 139491
Tssr139492 16 92824631 to 92824639 8 + TSS region transcription start site region 139492
Tssr142166 16 92825535 to 92825548 13 - TSS region transcription start site region 142166
Tssr142167 16 92825561 to 92825572 11 - TSS region transcription start site region 142167
Tssr142168 16 92825605 to 92825641 36 - TSS region transcription start site region 142168
Tssr142169 16 92825751 to 92825766 15 - TSS region transcription start site region 142169
Tssr142170 16 92825771 to 92825782 11 - TSS region transcription start site region 142170
Tssr142171 16 92825791 to 92825821 30 - TSS region transcription start site region 142171
Tssr142172 16 92825835 to 92825846 11 - TSS region transcription start site region 142172
Tssr142173 16 92825922 to 92825931 9 - TSS region transcription start site region 142173
Tssr142174 16 92825935 to 92825946 11 - TSS region transcription start site region 142174
Tssr142175 16 92825987 to 92826000 13 - TSS region transcription start site region 142175
Tssr142176 16 92826004 to 92826080 76 - TSS region transcription start site region 142176
Tssr142177 16 92826093 to 92826102 9 - TSS region transcription start site region 142177
Tssr4962 16 92831274 to 92831290 16 - TSS region transcription start site region 4962
Gm49723 16 92861877 to 92874472 12595 + lincRNA gene predicted gene, 49723
Tssr139493 16 92946799 to 92946823 24 + TSS region transcription start site region 139493
Tssr139494 16 92946832 to 92946839 7 + TSS region transcription start site region 139494
Gm41499 16 92956959 to 92959120 2161 + lncRNA gene predicted gene, 41499
Tssr139495 16 92995465 to 92995508 43 + TSS region transcription start site region 139495
Tssr139496 16 92995774 to 92995779 5 + TSS region transcription start site region 139496
Tssr4963 16 93002750 to 93002755 5 + TSS region transcription start site region 4963
Gm28003 16 93072755 to 93072822 67 + miRNA gene predicted gene, 28003