Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:92521457-92771578

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41 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Clic6 16 92498147 to 92541241 43094 + protein coding gene chloride intracellular channel 6
Tssr142130 16 92522046 to 92522053 7 - TSS region transcription start site region 142130
Tssr139485 16 92538986 to 92538987 1 + TSS region transcription start site region 139485
Tssr139486 16 92539879 to 92539882 3 + TSS region transcription start site region 139486
Gm49722 16 92549113 to 92553143 4030 - lincRNA gene predicted gene, 49722
Gm30224 16 92584375 to 92596158 11783 - lncRNA gene predicted gene, 30224
Tssr142131 16 92596113 to 92596126 13 - TSS region transcription start site region 142131
Tssr142132 16 92596146 to 92596155 9 - TSS region transcription start site region 142132
Runx1 16 92601466 to 92826074 224608 - protein coding gene runt related transcription factor 1
Tssr142133 16 92603049 to 92603094 45 - TSS region transcription start site region 142133
Tssr142134 16 92603150 to 92603165 15 - TSS region transcription start site region 142134
Tssr142135 16 92603186 to 92603199 13 - TSS region transcription start site region 142135
Tssr142136 16 92603220 to 92603229 9 - TSS region transcription start site region 142136
Tssr142137 16 92603254 to 92603265 11 - TSS region transcription start site region 142137
Tssr142138 16 92603298 to 92603311 13 - TSS region transcription start site region 142138
Cpgi8473 16 92605532 to 92606235 703 CpG island CpG island 8473
Tssr139487 16 92612755 to 92612776 21 + TSS region transcription start site region 139487
Gm26626 16 92612814 to 92620105 7291 + antisense lncRNA gene predicted gene, 26626
Tssr139488 16 92612856 to 92612879 23 + TSS region transcription start site region 139488
Tssr142139 16 92620760 to 92620773 13 - TSS region transcription start site region 142139
Tssr4961 16 92621285 to 92621289 4 + TSS region transcription start site region 4961
Tssr142140 16 92644213 to 92644252 39 - TSS region transcription start site region 142140
D16Mit128 16 92646457 to 92646578 121 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 128
Tssr142141 16 92646781 to 92646785 4 - TSS region transcription start site region 142141
D16Mit52 16 92676374 to 92676489 115 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 52
Tssr142142 16 92677468 to 92677472 4 - TSS region transcription start site region 142142
2900022M12Rik 16 92684222 to 92687239 3017 unclassified gene RIKEN cDNA 2900022M12 gene
A630044M17Rik 16 92691405 to 92694945 3540 unclassified gene RIKEN cDNA A630044M17 gene
Tssr142143 16 92694922 to 92694926 4 - TSS region transcription start site region 142143
Tssr142144 16 92695066 to 92695089 23 - TSS region transcription start site region 142144
Tssr142145 16 92695218 to 92695231 13 - TSS region transcription start site region 142145
Cpgi8474 16 92695291 to 92695988 697 CpG island CpG island 8474
Cpgi8475 16 92696644 to 92699157 2513 CpG island CpG island 8475
Tssr142146 16 92697109 to 92697117 8 - TSS region transcription start site region 142146
Tssr142147 16 92697315 to 92697347 32 - TSS region transcription start site region 142147
Cpgi8476 16 92699827 to 92700052 225 CpG island CpG island 8476
A430042E23Rik 16 92726177 to 92729510 3333 unclassified gene RIKEN cDNA A430042E23 gene
Tssr142148 16 92727214 to 92727218 4 - TSS region transcription start site region 142148
Tssr142149 16 92739498 to 92739499 1 - TSS region transcription start site region 142149
Gm30281 16 92761922 to 92767240 5318 + lncRNA gene predicted gene, 30281
Tssr142150 16 92762162 to 92762173 11 - TSS region transcription start site region 142150