Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:92499375-92681158

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28 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Clic6 16 92498147 to 92541241 43094 + protein coding gene chloride intracellular channel 6
Cpgi8472 16 92498339 to 92499619 1280 CpG island CpG island 8472
Tssr139484 16 92519053 to 92519077 24 + TSS region transcription start site region 139484
Tssr142130 16 92522046 to 92522053 7 - TSS region transcription start site region 142130
Tssr139485 16 92538986 to 92538987 1 + TSS region transcription start site region 139485
Tssr139486 16 92539879 to 92539882 3 + TSS region transcription start site region 139486
Gm49722 16 92549113 to 92553143 4030 - lincRNA gene predicted gene, 49722
Gm30224 16 92584375 to 92596158 11783 - lncRNA gene predicted gene, 30224
Tssr142131 16 92596113 to 92596126 13 - TSS region transcription start site region 142131
Tssr142132 16 92596146 to 92596155 9 - TSS region transcription start site region 142132
Runx1 16 92601466 to 92826074 224608 - protein coding gene runt related transcription factor 1
Tssr142133 16 92603049 to 92603094 45 - TSS region transcription start site region 142133
Tssr142134 16 92603150 to 92603165 15 - TSS region transcription start site region 142134
Tssr142135 16 92603186 to 92603199 13 - TSS region transcription start site region 142135
Tssr142136 16 92603220 to 92603229 9 - TSS region transcription start site region 142136
Tssr142137 16 92603254 to 92603265 11 - TSS region transcription start site region 142137
Tssr142138 16 92603298 to 92603311 13 - TSS region transcription start site region 142138
Cpgi8473 16 92605532 to 92606235 703 CpG island CpG island 8473
Tssr139487 16 92612755 to 92612776 21 + TSS region transcription start site region 139487
Gm26626 16 92612814 to 92620105 7291 + antisense lncRNA gene predicted gene, 26626
Tssr139488 16 92612856 to 92612879 23 + TSS region transcription start site region 139488
Tssr142139 16 92620760 to 92620773 13 - TSS region transcription start site region 142139
Tssr4961 16 92621285 to 92621289 4 + TSS region transcription start site region 4961
Tssr142140 16 92644213 to 92644252 39 - TSS region transcription start site region 142140
D16Mit128 16 92646457 to 92646578 121 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 128
Tssr142141 16 92646781 to 92646785 4 - TSS region transcription start site region 142141
D16Mit52 16 92676374 to 92676489 115 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 52
Tssr142142 16 92677468 to 92677472 4 - TSS region transcription start site region 142142