Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:92127389-92463129

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41 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm49711 16 92058316 to 92187341 129025 + protein coding gene predicted gene, 49711
Gm41496 16 92126288 to 92186528 60240 + lincRNA gene predicted gene, 41496
Gm41495 16 92154247 to 92156291 2044 + lincRNA gene predicted gene, 41495
Cpgi8466 16 92158581 to 92158797 216 CpG island CpG island 8466
Cpgi8467 16 92182976 to 92183219 243 CpG island CpG island 8467
Gm49716 16 92189062 to 92189503 441 - pseudogene predicted gene, 49716
Gm29880 16 92202901 to 92207488 4587 - lncRNA gene predicted gene, 29880
Gm41497 16 92245994 to 92249021 3027 + lncRNA gene predicted gene, 41497
Tssr139467 16 92291109 to 92291114 5 + TSS region transcription start site region 139467
Tssr139468 16 92292330 to 92292341 11 + TSS region transcription start site region 139468
Tssr139469 16 92292362 to 92292375 13 + TSS region transcription start site region 139469
Tssr139470 16 92292380 to 92292397 17 + TSS region transcription start site region 139470
Kcne2 16 92292389 to 92298129 5740 + protein coding gene potassium voltage-gated channel, Isk-related subfamily, gene 2
Tssr139471 16 92292398 to 92292411 13 + TSS region transcription start site region 139471
Tssr139472 16 92292450 to 92292461 11 + TSS region transcription start site region 139472
Cpgi8468 16 92301008 to 92301660 652 CpG island CpG island 8468
Tssr139473 16 92301266 to 92301323 57 + TSS region transcription start site region 139473
Smim11 16 92301303 to 92313041 11738 + protein coding gene small integral membrane protein 11
1700048M11Rik 16 92308716 to 92312466 3750 - antisense lncRNA gene RIKEN cDNA 1700048M11 gene
Fam243 16 92318765 to 92321441 2676 - protein coding gene family with sequence similarity 243
Tssr142117 16 92321393 to 92321400 7 - TSS region transcription start site region 142117
Tssr142118 16 92321406 to 92321422 16 - TSS region transcription start site region 142118
Tssr142119 16 92321425 to 92321446 21 - TSS region transcription start site region 142119
Tssr142120 16 92321454 to 92321461 7 - TSS region transcription start site region 142120
Smim34 16 92328897 to 92329254 357 - protein coding gene small integral membrane protein 34
Cpgi8469 16 92341201 to 92341395 194 CpG island CpG island 8469
Kcne1 16 92345995 to 92359468 13473 - protein coding gene potassium voltage-gated channel, Isk-related subfamily, member 1
Tssr142121 16 92346386 to 92346419 33 - TSS region transcription start site region 142121
Gm30163 16 92356704 to 92365910 9206 + lncRNA gene predicted gene, 30163
Tssr142122 16 92358881 to 92358925 44 - TSS region transcription start site region 142122
Tssr142123 16 92359424 to 92359428 4 - TSS region transcription start site region 142123
Gm29805 16 92377071 to 92382683 5612 - lincRNA gene predicted gene, 29805
Rcan1 16 92391951 to 92466169 74218 - protein coding gene regulator of calcineurin 1
Tssr142124 16 92398813 to 92398842 29 - TSS region transcription start site region 142124
Tssr142125 16 92399742 to 92399746 4 - TSS region transcription start site region 142125
Tssr142126 16 92400067 to 92400083 16 - TSS region transcription start site region 142126
Tssr139474 16 92423729 to 92423751 22 + TSS region transcription start site region 139474
Gm41498 16 92426171 to 92434060 7889 - lncRNA gene predicted gene, 41498
Tssr142127 16 92434517 to 92434527 10 - TSS region transcription start site region 142127
Gm46556 16 92452475 to 92456321 3846 + lncRNA gene predicted gene, 46556
Gm46555 16 92457477 to 92462490 5013 + antisense lncRNA gene predicted gene, 46555