Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:91897326-91997785

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18 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Itsn1 16 91729353 to 91920591 191238 + protein coding gene intersectin 1 (SH3 domain protein 1A)
D16Mit155 16 91910432 to 91910577 145 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 155
Gm25245 16 91921309 to 91921415 106 - snRNA gene predicted gene, 25245
Gm15976 16 91924438 to 91928635 4197 + antisense lncRNA gene predicted gene 15976
Atp5o 16 91925223 to 91931630 6407 - protein coding gene ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit
Cpgi8463 16 91931113 to 91931872 759 CpG island CpG island 8463
Tssr142112 16 91931554 to 91931618 64 - TSS region transcription start site region 142112
Tssr142113 16 91931623 to 91931632 9 - TSS region transcription start site region 142113
Tssr142114 16 91931643 to 91931654 11 - TSS region transcription start site region 142114
Gm36797 16 91936341 to 91940858 4517 - lncRNA gene predicted gene, 36797
Gm27773 16 91944071 to 91944148 77 - miRNA gene predicted gene, 27773
Tssr4960 16 91946661 to 91946662 1 + TSS region transcription start site region 4960
0610009F21Rik 16 91947326 to 91947785 459 unclassified gene RIKEN cDNA 0610009F21 gene
D430001F17Rik 16 91954010 to 91966230 12220 + antisense lncRNA gene RIKEN cDNA D430001F17 gene
Tssr142115 16 91964619 to 91964660 41 - TSS region transcription start site region 142115
Tssr142116 16 91964666 to 91964685 19 - TSS region transcription start site region 142116
Cpgi8464 16 91984571 to 91984868 297 CpG island CpG island 8464
Gm36905 16 91991195 to 91997309 6114 - lncRNA gene predicted gene, 36905