Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:91488019-91788030

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88 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ifnar1 16 91485238 to 91507441 22203 + protein coding gene interferon (alpha and beta) receptor 1
Tssr139401 16 91489694 to 91489707 13 + TSS region transcription start site region 139401
Tssr139402 16 91492636 to 91492658 22 + TSS region transcription start site region 139402
Tssr139403 16 91506181 to 91506225 44 + TSS region transcription start site region 139403
Gm7856 16 91513141 to 91514633 1492 - pseudogene predicted gene 7856
Cpgi8453 16 91514579 to 91514800 221 CpG island CpG island 8453
Tssr142091 16 91514806 to 91514810 4 - TSS region transcription start site region 142091
Tssr4956 16 91522653 to 91522665 12 - TSS region transcription start site region 4956
Cpgi8454 16 91522998 to 91523162 164 CpG island CpG island 8454
Mir6367 16 91527443 to 91527544 101 - miRNA gene microRNA 6367
Tssr142092 16 91533593 to 91533609 16 - TSS region transcription start site region 142092
Tssr139404 16 91534068 to 91534076 8 + TSS region transcription start site region 139404
Tssr4957 16 91534646 to 91534673 27 + TSS region transcription start site region 4957
Tssr4958 16 91534684 to 91534699 15 - TSS region transcription start site region 4958
Gm7860 16 91539182 to 91540060 878 - pseudogene predicted gene 7860
Tssr139405 16 91545673 to 91545694 21 + TSS region transcription start site region 139405
Tssr139406 16 91545711 to 91545722 11 + TSS region transcription start site region 139406
Cpgi8455 16 91546420 to 91547646 1226 CpG island CpG island 8455
Tssr139407 16 91547048 to 91547114 66 + TSS region transcription start site region 139407
Ifngr2 16 91547094 to 91564007 16913 + protein coding gene interferon gamma receptor 2
Tssr139408 16 91547232 to 91547273 41 + TSS region transcription start site region 139408
Tssr142093 16 91547613 to 91547640 27 - TSS region transcription start site region 142093
Tssr139409 16 91547829 to 91547840 11 + TSS region transcription start site region 139409
Tssr142094 16 91548161 to 91548195 34 - TSS region transcription start site region 142094
Tssr142095 16 91548287 to 91548310 23 - TSS region transcription start site region 142095
Tssr142096 16 91549744 to 91549767 23 - TSS region transcription start site region 142096
Tssr139410 16 91550537 to 91550545 8 + TSS region transcription start site region 139410
Tssr139411 16 91560184 to 91560192 8 + TSS region transcription start site region 139411
Tssr139412 16 91560543 to 91560559 16 + TSS region transcription start site region 139412
Tssr139413 16 91561289 to 91561301 12 + TSS region transcription start site region 139413
Tssr139414 16 91561316 to 91561331 15 + TSS region transcription start site region 139414
Cpgi8456 16 91561562 to 91561867 305 CpG island CpG island 8456
Tssr139415 16 91561722 to 91561752 30 + TSS region transcription start site region 139415
Tssr139416 16 91563007 to 91563025 18 + TSS region transcription start site region 139416
Tssr139417 16 91563029 to 91563064 35 + TSS region transcription start site region 139417
Tssr139418 16 91563420 to 91563458 38 + TSS region transcription start site region 139418
Tssr139419 16 91563536 to 91563541 5 + TSS region transcription start site region 139419
Tssr139420 16 91563579 to 91563585 6 + TSS region transcription start site region 139420
Tmem50b 16 91574508 to 91597680 23172 - protein coding gene transmembrane protein 50B
Cpgi8457 16 91596824 to 91598197 1373 CpG island CpG island 8457
Tssr142097 16 91597386 to 91597415 29 - TSS region transcription start site region 142097
Tssr142098 16 91597636 to 91597735 99 - TSS region transcription start site region 142098
Gm15964 16 91611468 to 91623861 12393 + antisense lncRNA gene predicted gene 15964
Tssr139421 16 91611491 to 91611537 46 + TSS region transcription start site region 139421
Dnajc28 16 91614257 to 91618999 4742 - protein coding gene DnaJ heat shock protein family (Hsp40) member C28
Cpgi8458 16 91618615 to 91619109 494 CpG island CpG island 8458
Tssr142099 16 91618986 to 91619024 38 - TSS region transcription start site region 142099
Gart 16 91621186 to 91646952 25766 - protein coding gene phosphoribosylglycinamide formyltransferase
Tssr4959 16 91633820 to 91633867 47 + TSS region transcription start site region 4959
Tssr142100 16 91638019 to 91638030 11 - TSS region transcription start site region 142100
Cpgi8459 16 91646669 to 91648394 1725 CpG island CpG island 8459
Tssr142101 16 91646906 to 91646960 54 - TSS region transcription start site region 142101
Tssr139422 16 91647060 to 91647106 46 + TSS region transcription start site region 139422
Tssr142102 16 91647629 to 91647650 21 - TSS region transcription start site region 142102
Tssr142103 16 91647691 to 91647714 23 - TSS region transcription start site region 142103
Son 16 91647824 to 91679195 31371 + protein coding gene Son DNA binding protein
Tssr139423 16 91647842 to 91647858 16 + TSS region transcription start site region 139423
Tssr139424 16 91647859 to 91647905 46 + TSS region transcription start site region 139424
Tssr139425 16 91651678 to 91651700 22 + TSS region transcription start site region 139425
Tssr139426 16 91651746 to 91651777 31 + TSS region transcription start site region 139426
Gm36712 16 91651803 to 91653026 1223 + protein coding gene predicted gene, 36712
Tssr139427 16 91654621 to 91654675 54 + TSS region transcription start site region 139427
Tssr139428 16 91659512 to 91659538 26 + TSS region transcription start site region 139428
Tssr139429 16 91659658 to 91659713 55 + TSS region transcription start site region 139429
Tssr139430 16 91663380 to 91663401 21 + TSS region transcription start site region 139430
Tssr139431 16 91663958 to 91663970 12 + TSS region transcription start site region 139431
Tssr139432 16 91676479 to 91676483 4 + TSS region transcription start site region 139432
Donson 16 91676808 to 91688770 11962 - protein coding gene downstream neighbor of SON
Tssr142104 16 91685637 to 91685665 28 - TSS region transcription start site region 142104
Cpgi8460 16 91688179 to 91689303 1124 CpG island CpG island 8460
Tssr142105 16 91688709 to 91688774 65 - TSS region transcription start site region 142105
Tssr142106 16 91688791 to 91688802 11 - TSS region transcription start site region 142106
Gm10785 16 91688898 to 91715642 26744 + antisense lncRNA gene predicted gene 10785
Cryzl1 16 91689322 to 91728802 39480 - protein coding gene crystallin, zeta (quinone reductase)-like 1
Gm46543 16 91723808 to 91728607 4799 + lncRNA gene predicted gene, 46543
Cpgi8461 16 91728312 to 91730229 1917 CpG island CpG island 8461
Tssr142107 16 91728599 to 91728637 38 - TSS region transcription start site region 142107
Tssr142108 16 91728723 to 91728730 7 - TSS region transcription start site region 142108
Tssr142109 16 91728767 to 91728776 9 - TSS region transcription start site region 142109
Tssr142110 16 91729060 to 91729092 32 - TSS region transcription start site region 142110
Tssr139433 16 91729316 to 91729390 74 + TSS region transcription start site region 139433
Itsn1 16 91729353 to 91920591 191238 + protein coding gene intersectin 1 (SH3 domain protein 1A)
Tssr142111 16 91729381 to 91729392 11 - TSS region transcription start site region 142111
Tssr139434 16 91729402 to 91729435 33 + TSS region transcription start site region 139434
Tssr139435 16 91729436 to 91729474 38 + TSS region transcription start site region 139435
Tssr139436 16 91738929 to 91738963 34 + TSS region transcription start site region 139436
Tssr139437 16 91739271 to 91739285 14 + TSS region transcription start site region 139437
Tssr139438 16 91740112 to 91740137 25 + TSS region transcription start site region 139438