Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:91395125-91546984

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80 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ifnar2 16 91372783 to 91405589 32806 + protein coding gene interferon (alpha and beta) receptor 2
Gm21970 16 91391721 to 91419451 27730 + protein coding gene predicted gene 21970
Tssr139357 16 91397125 to 91397130 5 + TSS region transcription start site region 139357
Tssr139358 16 91399013 to 91399022 9 + TSS region transcription start site region 139358
Tssr139359 16 91399340 to 91399350 10 + TSS region transcription start site region 139359
Tssr139360 16 91399974 to 91400016 42 + TSS region transcription start site region 139360
Tssr139361 16 91405821 to 91405844 23 + TSS region transcription start site region 139361
Cpgi8450 16 91406032 to 91406825 793 CpG island CpG island 8450
Tssr139362 16 91406145 to 91406159 14 + TSS region transcription start site region 139362
Tssr139363 16 91406174 to 91406191 17 + TSS region transcription start site region 139363
Tssr139364 16 91406195 to 91406208 13 + TSS region transcription start site region 139364
Tssr139365 16 91406212 to 91406223 11 + TSS region transcription start site region 139365
Il10rb 16 91406235 to 91425834 19599 + protein coding gene interleukin 10 receptor, beta
Tssr139366 16 91406239 to 91406334 95 + TSS region transcription start site region 139366
Tssr139367 16 91406342 to 91406349 7 + TSS region transcription start site region 139367
Tssr139368 16 91406367 to 91406378 11 + TSS region transcription start site region 139368
Tssr139369 16 91406438 to 91406460 22 + TSS region transcription start site region 139369
Tssr139370 16 91406464 to 91406486 22 + TSS region transcription start site region 139370
Tssr142083 16 91406830 to 91406860 30 - TSS region transcription start site region 142083
Tssr142084 16 91406889 to 91406902 13 - TSS region transcription start site region 142084
Tssr139371 16 91406994 to 91407015 21 + TSS region transcription start site region 139371
Tssr139372 16 91407029 to 91407041 12 + TSS region transcription start site region 139372
Tssr139373 16 91407055 to 91407075 20 + TSS region transcription start site region 139373
Tssr139374 16 91407085 to 91407132 47 + TSS region transcription start site region 139374
Tssr139375 16 91407135 to 91407149 14 + TSS region transcription start site region 139375
Tssr139376 16 91407227 to 91407246 19 + TSS region transcription start site region 139376
Tssr139377 16 91407498 to 91407519 21 + TSS region transcription start site region 139377
Tssr139378 16 91416049 to 91416065 16 + TSS region transcription start site region 139378
Tssr139379 16 91420859 to 91420941 82 + TSS region transcription start site region 139379
Tssr139380 16 91420974 to 91421013 39 + TSS region transcription start site region 139380
Tssr139381 16 91421773 to 91421796 23 + TSS region transcription start site region 139381
Tssr139382 16 91424870 to 91424892 22 + TSS region transcription start site region 139382
Tssr139383 16 91425053 to 91425077 24 + TSS region transcription start site region 139383
Tssr142085 16 91425122 to 91425151 29 - TSS region transcription start site region 142085
Tssr139384 16 91425338 to 91425350 12 + TSS region transcription start site region 139384
Tssr139385 16 91425410 to 91425430 20 + TSS region transcription start site region 139385
Gm49625 16 91435293 to 91464803 29510 - lincRNA gene predicted gene, 49625
Tssr142086 16 91441541 to 91441542 1 - TSS region transcription start site region 142086
Tssr139386 16 91458405 to 91458427 22 + TSS region transcription start site region 139386
Gm46562 16 91458421 to 91458612 191 + pseudogene predicted gene, 46562
Tssr139387 16 91458717 to 91458748 31 + TSS region transcription start site region 139387
Tssr139388 16 91462139 to 91462152 13 + TSS region transcription start site region 139388
Cpgi8451 16 91464683 to 91465313 630 CpG island CpG island 8451
Tssr142087 16 91464815 to 91464828 13 - TSS region transcription start site region 142087
Tssr142088 16 91464837 to 91464891 54 - TSS region transcription start site region 142088
Tssr139389 16 91464990 to 91465019 29 + TSS region transcription start site region 139389
Tssr139390 16 91465021 to 91465032 11 + TSS region transcription start site region 139390
Tssr139391 16 91465033 to 91465051 18 + TSS region transcription start site region 139391
Tssr139392 16 91465079 to 91465111 32 + TSS region transcription start site region 139392
A930006K02Rik 16 91465104 to 91470123 5019 + lncRNA gene RIKEN cDNA A930006K02 gene
Gm49626 16 91465125 to 91476984 11859 + pseudogene predicted gene, 49626
Tssr139393 16 91465134 to 91465145 11 + TSS region transcription start site region 139393
Tssr139394 16 91465165 to 91465193 28 + TSS region transcription start site region 139394
Tssr142089 16 91466642 to 91466677 35 - TSS region transcription start site region 142089
Tssr139395 16 91475876 to 91475897 21 + TSS region transcription start site region 139395
Cpgi8452 16 91484850 to 91485682 832 CpG island CpG island 8452
Tssr142090 16 91484918 to 91484936 18 - TSS region transcription start site region 142090
Tssr139396 16 91485053 to 91485066 13 + TSS region transcription start site region 139396
Tssr139397 16 91485067 to 91485105 38 + TSS region transcription start site region 139397
Tssr139398 16 91485115 to 91485144 29 + TSS region transcription start site region 139398
Tssr139399 16 91485233 to 91485294 61 + TSS region transcription start site region 139399
Ifnar1 16 91485238 to 91507441 22203 + protein coding gene interferon (alpha and beta) receptor 1
Tssr139400 16 91485295 to 91485309 14 + TSS region transcription start site region 139400
Tssr139401 16 91489694 to 91489707 13 + TSS region transcription start site region 139401
Tssr139402 16 91492636 to 91492658 22 + TSS region transcription start site region 139402
Tssr139403 16 91506181 to 91506225 44 + TSS region transcription start site region 139403
Gm7856 16 91513141 to 91514633 1492 - pseudogene predicted gene 7856
Cpgi8453 16 91514579 to 91514800 221 CpG island CpG island 8453
Tssr142091 16 91514806 to 91514810 4 - TSS region transcription start site region 142091
Tssr4956 16 91522653 to 91522665 12 - TSS region transcription start site region 4956
Cpgi8454 16 91522998 to 91523162 164 CpG island CpG island 8454
Mir6367 16 91527443 to 91527544 101 - miRNA gene microRNA 6367
Tssr142092 16 91533593 to 91533609 16 - TSS region transcription start site region 142092
Tssr139404 16 91534068 to 91534076 8 + TSS region transcription start site region 139404
Tssr4957 16 91534646 to 91534673 27 + TSS region transcription start site region 4957
Tssr4958 16 91534684 to 91534699 15 - TSS region transcription start site region 4958
Gm7860 16 91539182 to 91540060 878 - pseudogene predicted gene 7860
Tssr139405 16 91545673 to 91545694 21 + TSS region transcription start site region 139405
Tssr139406 16 91545711 to 91545722 11 + TSS region transcription start site region 139406
Cpgi8455 16 91546420 to 91547646 1226 CpG island CpG island 8455