Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:91209702-91489784

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111 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi8440 16 91211668 to 91212070 402 CpG island CpG island 8440
Cpgi8441 16 91219907 to 91220455 548 CpG island CpG island 8441
Tssr139336 16 91221078 to 91221080 2 + TSS region transcription start site region 139336
Gm49614 16 91222100 to 91222926 826 - unclassified gene predicted gene, 49614
Cpgi8442 16 91222160 to 91223841 1681 CpG island CpG island 8442
Cpgi8443 16 91224947 to 91227827 2880 CpG island CpG island 8443
Tssr139337 16 91225409 to 91225426 17 + TSS region transcription start site region 139337
Tssr139338 16 91225446 to 91225455 9 + TSS region transcription start site region 139338
Olig2 16 91225550 to 91228677 3127 + protein coding gene oligodendrocyte transcription factor 2
Tssr139339 16 91225563 to 91225579 16 + TSS region transcription start site region 139339
Cpgi8444 16 91228274 to 91228566 292 CpG island CpG island 8444
Cpgi8445 16 91232351 to 91232685 334 CpG island CpG island 8445
Gm37016 16 91262498 to 91263298 800 + unclassified gene predicted gene, 37016
Cpgi8446 16 91269505 to 91271839 2334 CpG island CpG island 8446
Tssr139340 16 91269727 to 91269733 6 + TSS region transcription start site region 139340
Tssr139341 16 91269759 to 91269778 19 + TSS region transcription start site region 139341
Olig1 16 91269772 to 91271933 2161 + protein coding gene oligodendrocyte transcription factor 1
Tssr139342 16 91269846 to 91269898 52 + TSS region transcription start site region 139342
Gm15966 16 91271777 to 91329043 57266 - lincRNA gene predicted gene 15966
Cpgi8447 16 91310514 to 91310717 203 CpG island CpG island 8447
Cpgi8448 16 91329023 to 91329305 282 CpG island CpG island 8448
Gm24695 16 91349702 to 91349784 82 - snRNA gene predicted gene, 24695
Tssr4954 16 91354839 to 91354859 20 + TSS region transcription start site region 4954
Tssr142077 16 91355234 to 91355252 18 - TSS region transcription start site region 142077
Tssr4955 16 91355337 to 91355369 32 - TSS region transcription start site region 4955
Tssr142078 16 91362761 to 91362772 11 - TSS region transcription start site region 142078
Tssr142079 16 91362777 to 91362788 11 - TSS region transcription start site region 142079
Gm36587 16 91365577 to 91379807 14230 - lncRNA gene predicted gene, 36587
Tssr142080 16 91367114 to 91367167 53 - TSS region transcription start site region 142080
D16Mit26 16 91370737 to 91370886 149 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 26
Cpgi8449 16 91372514 to 91373494 980 CpG island CpG island 8449
Tssr142081 16 91372674 to 91372699 25 - TSS region transcription start site region 142081
Ifnar2 16 91372783 to 91405589 32806 + protein coding gene interferon (alpha and beta) receptor 2
Tssr139343 16 91372786 to 91372864 78 + TSS region transcription start site region 139343
Tssr139344 16 91372865 to 91372878 13 + TSS region transcription start site region 139344
Tssr139345 16 91372882 to 91372893 11 + TSS region transcription start site region 139345
Tssr142082 16 91373099 to 91373111 12 - TSS region transcription start site region 142082
Tssr139346 16 91373209 to 91373253 44 + TSS region transcription start site region 139346
Tssr139347 16 91377537 to 91377548 11 + TSS region transcription start site region 139347
Tssr139348 16 91386000 to 91386039 39 + TSS region transcription start site region 139348
Tssr139349 16 91387773 to 91387781 8 + TSS region transcription start site region 139349
Tssr139350 16 91388018 to 91388042 24 + TSS region transcription start site region 139350
Tssr139351 16 91388064 to 91388081 17 + TSS region transcription start site region 139351
Gm21970 16 91391721 to 91419451 27730 + protein coding gene predicted gene 21970
Tssr139352 16 91391743 to 91391769 26 + TSS region transcription start site region 139352
Tssr139353 16 91391772 to 91391796 24 + TSS region transcription start site region 139353
Tssr139354 16 91391811 to 91391840 29 + TSS region transcription start site region 139354
Tssr139355 16 91393779 to 91393829 50 + TSS region transcription start site region 139355
Tssr139356 16 91393847 to 91393867 20 + TSS region transcription start site region 139356
Tssr139357 16 91397125 to 91397130 5 + TSS region transcription start site region 139357
Tssr139358 16 91399013 to 91399022 9 + TSS region transcription start site region 139358
Tssr139359 16 91399340 to 91399350 10 + TSS region transcription start site region 139359
Tssr139360 16 91399974 to 91400016 42 + TSS region transcription start site region 139360
Tssr139361 16 91405821 to 91405844 23 + TSS region transcription start site region 139361
Cpgi8450 16 91406032 to 91406825 793 CpG island CpG island 8450
Tssr139362 16 91406145 to 91406159 14 + TSS region transcription start site region 139362
Tssr139363 16 91406174 to 91406191 17 + TSS region transcription start site region 139363
Tssr139364 16 91406195 to 91406208 13 + TSS region transcription start site region 139364
Tssr139365 16 91406212 to 91406223 11 + TSS region transcription start site region 139365
Il10rb 16 91406235 to 91425834 19599 + protein coding gene interleukin 10 receptor, beta
Tssr139366 16 91406239 to 91406334 95 + TSS region transcription start site region 139366
Tssr139367 16 91406342 to 91406349 7 + TSS region transcription start site region 139367
Tssr139368 16 91406367 to 91406378 11 + TSS region transcription start site region 139368
Tssr139369 16 91406438 to 91406460 22 + TSS region transcription start site region 139369
Tssr139370 16 91406464 to 91406486 22 + TSS region transcription start site region 139370
Tssr142083 16 91406830 to 91406860 30 - TSS region transcription start site region 142083
Tssr142084 16 91406889 to 91406902 13 - TSS region transcription start site region 142084
Tssr139371 16 91406994 to 91407015 21 + TSS region transcription start site region 139371
Tssr139372 16 91407029 to 91407041 12 + TSS region transcription start site region 139372
Tssr139373 16 91407055 to 91407075 20 + TSS region transcription start site region 139373
Tssr139374 16 91407085 to 91407132 47 + TSS region transcription start site region 139374
Tssr139375 16 91407135 to 91407149 14 + TSS region transcription start site region 139375
Tssr139376 16 91407227 to 91407246 19 + TSS region transcription start site region 139376
Tssr139377 16 91407498 to 91407519 21 + TSS region transcription start site region 139377
Tssr139378 16 91416049 to 91416065 16 + TSS region transcription start site region 139378
Tssr139379 16 91420859 to 91420941 82 + TSS region transcription start site region 139379
Tssr139380 16 91420974 to 91421013 39 + TSS region transcription start site region 139380
Tssr139381 16 91421773 to 91421796 23 + TSS region transcription start site region 139381
Tssr139382 16 91424870 to 91424892 22 + TSS region transcription start site region 139382
Tssr139383 16 91425053 to 91425077 24 + TSS region transcription start site region 139383
Tssr142085 16 91425122 to 91425151 29 - TSS region transcription start site region 142085
Tssr139384 16 91425338 to 91425350 12 + TSS region transcription start site region 139384
Tssr139385 16 91425410 to 91425430 20 + TSS region transcription start site region 139385
Gm49625 16 91435293 to 91464803 29510 - lincRNA gene predicted gene, 49625
Tssr142086 16 91441541 to 91441542 1 - TSS region transcription start site region 142086
Tssr139386 16 91458405 to 91458427 22 + TSS region transcription start site region 139386
Gm46562 16 91458421 to 91458612 191 + pseudogene predicted gene, 46562
Tssr139387 16 91458717 to 91458748 31 + TSS region transcription start site region 139387
Tssr139388 16 91462139 to 91462152 13 + TSS region transcription start site region 139388
Cpgi8451 16 91464683 to 91465313 630 CpG island CpG island 8451
Tssr142087 16 91464815 to 91464828 13 - TSS region transcription start site region 142087
Tssr142088 16 91464837 to 91464891 54 - TSS region transcription start site region 142088
Tssr139389 16 91464990 to 91465019 29 + TSS region transcription start site region 139389
Tssr139390 16 91465021 to 91465032 11 + TSS region transcription start site region 139390
Tssr139391 16 91465033 to 91465051 18 + TSS region transcription start site region 139391
Tssr139392 16 91465079 to 91465111 32 + TSS region transcription start site region 139392
A930006K02Rik 16 91465104 to 91470123 5019 + lncRNA gene RIKEN cDNA A930006K02 gene
Gm49626 16 91465125 to 91476984 11859 + pseudogene predicted gene, 49626
Tssr139393 16 91465134 to 91465145 11 + TSS region transcription start site region 139393
Tssr139394 16 91465165 to 91465193 28 + TSS region transcription start site region 139394
Tssr142089 16 91466642 to 91466677 35 - TSS region transcription start site region 142089
Tssr139395 16 91475876 to 91475897 21 + TSS region transcription start site region 139395
Cpgi8452 16 91484850 to 91485682 832 CpG island CpG island 8452
Tssr142090 16 91484918 to 91484936 18 - TSS region transcription start site region 142090
Tssr139396 16 91485053 to 91485066 13 + TSS region transcription start site region 139396
Tssr139397 16 91485067 to 91485105 38 + TSS region transcription start site region 139397
Tssr139398 16 91485115 to 91485144 29 + TSS region transcription start site region 139398
Tssr139399 16 91485233 to 91485294 61 + TSS region transcription start site region 139399
Ifnar1 16 91485238 to 91507441 22203 + protein coding gene interferon (alpha and beta) receptor 1
Tssr139400 16 91485295 to 91485309 14 + TSS region transcription start site region 139400
Tssr139401 16 91489694 to 91489707 13 + TSS region transcription start site region 139401