Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:90454164-90654886

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18 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Hunk 16 90386397 to 90499555 113158 + protein coding gene hormonally upregulated Neu-associated kinase
Tssr139293 16 90497168 to 90497200 32 + TSS region transcription start site region 139293
Tssr139294 16 90497204 to 90497213 9 + TSS region transcription start site region 139294
Tssr139295 16 90498497 to 90498506 9 + TSS region transcription start site region 139295
Gm35882 16 90500217 to 90519466 19249 - lncRNA gene predicted gene, 35882
Gm41490 16 90509100 to 90517541 8441 + lncRNA gene predicted gene, 41490
Cpgi8425 16 90520353 to 90520679 326 CpG island CpG island 8425
Cpgi8426 16 90524161 to 90524602 441 CpG island CpG island 8426
Gm35939 16 90525798 to 90529417 3619 + lncRNA gene predicted gene, 35939
Gm36001 16 90548636 to 90550609 1973 - lincRNA gene predicted gene, 36001
0710001L09Rik 16 90549863 to 90550178 315 unclassified gene RIKEN cDNA 0710001L09 gene
1110008E08Rik 16 90554164 to 90554886 722 + lincRNA gene RIKEN cDNA 1110008E08 gene
Gm36063 16 90586977 to 90627570 40593 - lncRNA gene predicted gene, 36063
Gm49714 16 90596773 to 90602619 5846 + lincRNA gene predicted gene, 49714
Gm23406 16 90602496 to 90602617 121 + snoRNA gene predicted gene, 23406
Tssr142026 16 90615959 to 90615960 1 - TSS region transcription start site region 142026
Gm36116 16 90627722 to 90629354 1632 + lncRNA gene predicted gene, 36116
D16Ium75 16 90628506 to 90628672 166 DNA segment DNA segment, Chr 16, Indiana University Medical 75