MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 16:90405798-90649417

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19 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Hunk	16	90386397 to 90499555	113158	+	protein coding gene	hormonally upregulated Neu-associated kinase
Tssr139292	16	90430511 to 90430534	23	+	TSS region	transcription start site region 139292
Tssr139293	16	90497168 to 90497200	32	+	TSS region	transcription start site region 139293
Tssr139294	16	90497204 to 90497213	9	+	TSS region	transcription start site region 139294
Tssr139295	16	90498497 to 90498506	9	+	TSS region	transcription start site region 139295
Gm35882	16	90500217 to 90519466	19249	-	lncRNA gene	predicted gene, 35882
Gm41490	16	90509100 to 90517541	8441	+	lncRNA gene	predicted gene, 41490
Cpgi8425	16	90520353 to 90520679	326		CpG island	CpG island 8425
Cpgi8426	16	90524161 to 90524602	441		CpG island	CpG island 8426
Gm35939	16	90525798 to 90529417	3619	+	lncRNA gene	predicted gene, 35939
Gm36001	16	90548636 to 90550609	1973	-	lincRNA gene	predicted gene, 36001
0710001L09Rik	16	90549863 to 90550178	315		unclassified gene	RIKEN cDNA 0710001L09 gene
1110008E08Rik	16	90554164 to 90554886	722	+	lincRNA gene	RIKEN cDNA 1110008E08 gene
Gm36063	16	90586977 to 90627570	40593	-	lncRNA gene	predicted gene, 36063
Gm49714	16	90596773 to 90602619	5846	+	lincRNA gene	predicted gene, 49714
Gm23406	16	90602496 to 90602617	121	+	snoRNA gene	predicted gene, 23406
Tssr142026	16	90615959 to 90615960	1	-	TSS region	transcription start site region 142026
Gm36116	16	90627722 to 90629354	1632	+	lncRNA gene	predicted gene, 36116
D16Ium75	16	90628506 to 90628672	166		DNA segment	DNA segment, Chr 16, Indiana University Medical 75