Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:90194412-90374498

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29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
D16Ium51 16 90194938 to 90195040 102 DNA segment DNA segment, Chr 16, Indiana University Medical 51
Gm35714 16 90197313 to 90203802 6489 - lncRNA gene predicted gene, 35714
Gm49704 16 90198148 to 90198658 510 + pseudogene predicted gene, 49704
Tssr139276 16 90219661 to 90219686 25 + TSS region transcription start site region 139276
Cpgi8420 16 90220300 to 90221603 1303 CpG island CpG island 8420
Tssr139277 16 90220534 to 90220537 3 + TSS region transcription start site region 139277
Tssr139278 16 90220569 to 90220589 20 + TSS region transcription start site region 139278
Tssr139279 16 90220594 to 90220610 16 + TSS region transcription start site region 139279
Tssr139280 16 90220620 to 90220632 12 + TSS region transcription start site region 139280
Tssr139281 16 90220636 to 90220641 5 + TSS region transcription start site region 139281
Tssr139282 16 90220708 to 90220725 17 + TSS region transcription start site region 139282
Tssr139283 16 90220747 to 90220771 24 + TSS region transcription start site region 139283
Sod1 16 90220754 to 90226329 5575 + protein coding gene superoxide dismutase 1, soluble
Scaf4 16 90228950 to 90284503 55553 - protein coding gene SR-related CTD-associated factor 4
Tssr142020 16 90259530 to 90259547 17 - TSS region transcription start site region 142020
Tssr142021 16 90265001 to 90265005 4 - TSS region transcription start site region 142021
Tssr139284 16 90283219 to 90283230 11 + TSS region transcription start site region 139284
Cpgi8421 16 90283267 to 90285342 2075 CpG island CpG island 8421
Tssr142022 16 90284271 to 90284285 14 - TSS region transcription start site region 142022
Tssr142023 16 90284300 to 90284348 48 - TSS region transcription start site region 142023
Tssr142024 16 90284382 to 90284393 11 - TSS region transcription start site region 142024
Tssr142025 16 90284412 to 90284498 86 - TSS region transcription start site region 142025
Tssr139285 16 90284557 to 90284626 69 + TSS region transcription start site region 139285
Cpgi8422 16 90314603 to 90314809 206 CpG island CpG island 8422
Gm49707 16 90314872 to 90331061 16189 + lincRNA gene predicted gene, 49707
Cpgi8423 16 90335767 to 90336041 274 CpG island CpG island 8423
Gm49708 16 90341595 to 90349642 8047 - unclassified non-coding RNA gene predicted gene, 49708
Gm49709 16 90349417 to 90362580 13163 + lincRNA gene predicted gene, 49709
Gm49710 16 90353182 to 90363117 9935 - lincRNA gene predicted gene, 49710