Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:89545420-89819145

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19 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Krtap11-1 16 89570176 to 89571183 1007 - protein coding gene keratin associated protein 11-1
Tssr141990 16 89571144 to 89571153 9 - TSS region transcription start site region 141990
Tssr141991 16 89571171 to 89571190 19 - TSS region transcription start site region 141991
Gm49696 16 89584535 to 89584998 463 + lincRNA gene predicted gene, 49696
Tssr139271 16 89585954 to 89585962 8 + TSS region transcription start site region 139271
Gm17844 16 89632842 to 89633415 573 - pseudogene predicted gene, 17844
Gm35500 16 89645420 to 89719145 73725 - lncRNA gene predicted gene, 35500
Tssr141992 16 89701440 to 89701445 5 - TSS region transcription start site region 141992
Tssr141993 16 89733179 to 89733184 5 - TSS region transcription start site region 141993
Cpgi8407 16 89772820 to 89773446 626 CpG island CpG island 8407
Cpgi8408 16 89773880 to 89774094 214 CpG island CpG island 8408
Dp(16Tiam1-Kcnj6)6Yey 16 89787111 to 94997696 5210585 chromosomal duplication duplication, Chr 16, Y Eugene Yu 6
Del(16Tiam1-Kcnj6)7Yey 16 89787111 to 94997696 5210585 chromosomal deletion deletion, Chr 16, Y Eugene Yu 7
Tiam1 16 89787111 to 90143769 356658 - protein coding gene T cell lymphoma invasion and metastasis 1
Cpgi8409 16 89817954 to 89818164 210 CpG island CpG island 8409
Tssr141994 16 89818191 to 89818202 11 - TSS region transcription start site region 141994
Tssr141995 16 89818315 to 89818327 12 - TSS region transcription start site region 141995
Tssr141996 16 89818338 to 89818356 18 - TSS region transcription start site region 141996
Tssr141997 16 89818358 to 89818397 39 - TSS region transcription start site region 141997