Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:89173386-89403631

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29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr139258 16 89174732 to 89174736 4 + TSS region transcription start site region 139258
1110057P08Rik 16 89174741 to 89175193 452 + protein coding gene RIKEN cDNA 1110057P08 gene
Tssr139259 16 89183259 to 89183263 4 + TSS region transcription start site region 139259
Gm34396 16 89183315 to 89183497 182 + protein coding gene predicted gene, 34396
Tssr139260 16 89205858 to 89205862 4 + TSS region transcription start site region 139260
Krtap20-2 16 89205861 to 89206394 533 + protein coding gene keratin associated protein 20-2
Tssr139261 16 89211475 to 89211481 6 + TSS region transcription start site region 139261
Gm34478 16 89211487 to 89211781 294 + protein coding gene predicted gene, 34478
Tssr139262 16 89215929 to 89215932 3 + TSS region transcription start site region 139262
Gm34566 16 89215952 to 89216160 208 + protein coding gene predicted gene, 34566
Gm34650 16 89222396 to 89222646 250 + protein coding gene predicted gene, 34650
Gm34733 16 89226811 to 89227103 292 + protein coding gene predicted gene, 34733
Tssr139263 16 89226826 to 89226831 5 + TSS region transcription start site region 139263
Gm34826 16 89230783 to 89231006 223 + protein coding gene predicted gene, 34826
Gm35004 16 89242633 to 89242808 175 + protein coding gene predicted gene, 35004
Gm35091 16 89247120 to 89247305 185 + protein coding gene predicted gene, 35091
Gm35174 16 89250970 to 89251267 297 + protein coding gene predicted gene, 35174
Tssr139264 16 89250997 to 89251003 6 + TSS region transcription start site region 139264
Gm35257 16 89260831 to 89261208 377 + protein coding gene predicted gene, 35257
Tssr139265 16 89274451 to 89274457 6 + TSS region transcription start site region 139265
Gm35342 16 89274509 to 89274667 158 + protein coding gene predicted gene, 35342
Gm41488 16 89276381 to 89278306 1925 - lncRNA gene predicted gene, 41488
Gm35427 16 89278331 to 89278788 457 + protein coding gene predicted gene, 35427
Tssr139266 16 89278408 to 89278410 2 + TSS region transcription start site region 139266
Tssr139267 16 89288327 to 89288334 7 + TSS region transcription start site region 139267
Gm33084 16 89288386 to 89288631 245 + protein coding gene predicted gene, 33084
Tssr139268 16 89306926 to 89306937 11 + TSS region transcription start site region 139268
D16Mit227 16 89345379 to 89345528 149 DNA segment DNA Segment, Chr 16, Massachusetts Institute of Technology-227
Krtap21-1 16 89403218 to 89403868 650 - protein coding gene keratin associated protein 21-1