Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:8789512-9229694

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33 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr139881 16 8792302 to 8792326 24 - TSS region transcription start site region 139881
Tssr139882 16 8792331 to 8792348 17 - TSS region transcription start site region 139882
Tssr139883 16 8792366 to 8792377 11 - TSS region transcription start site region 139883
Tssr139884 16 8823808 to 8823826 18 - TSS region transcription start site region 139884
Cpgi7943 16 8829109 to 8831508 2399 CpG island CpG island 7943
Tssr137006 16 8829996 to 8830021 25 + TSS region transcription start site region 137006
Tssr137007 16 8830037 to 8830058 21 + TSS region transcription start site region 137007
Tssr137008 16 8830093 to 8830104 11 + TSS region transcription start site region 137008
1810013L24Rik 16 8830100 to 8858922 28822 + protein coding gene RIKEN cDNA 1810013L24 gene
Tssr137009 16 8830115 to 8830142 27 + TSS region transcription start site region 137009
Tssr137010 16 8831096 to 8831110 14 + TSS region transcription start site region 137010
Tssr137011 16 8835964 to 8835970 6 + TSS region transcription start site region 137011
Tssr137012 16 8837762 to 8837766 4 + TSS region transcription start site region 137012
Tssr137013 16 8839526 to 8839529 3 + TSS region transcription start site region 137013
Tssr137014 16 8850813 to 8850817 4 + TSS region transcription start site region 137014
Tssr137015 16 8856993 to 8857000 7 + TSS region transcription start site region 137015
Gm22224 16 8873079 to 8873171 92 - rRNA gene predicted gene, 22224
Gm30310 16 8881614 to 8896050 14436 + lncRNA gene predicted gene, 30310
Gm10247 16 8922060 to 8922389 329 - pseudogene predicted gene 10247
Tssr137016 16 8944889 to 8944910 21 + TSS region transcription start site region 137016
Gm30371 16 8961301 to 8969900 8599 + lincRNA gene predicted gene, 30371
Gm49447 16 8996088 to 8996396 308 - pseudogene predicted gene, 49447
Gm30444 16 8997527 to 9007239 9712 + lncRNA gene predicted gene, 30444
Cpgi7944 16 9009512 to 9009694 182 CpG island CpG island 7944
Gm30567 16 9054647 to 9055420 773 + lincRNA gene predicted gene, 30567
D16Mit162 16 9062913 to 9063031 118 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 162
Gm49448 16 9079396 to 9137444 58048 + lincRNA gene predicted gene, 49448
Gm18722 16 9104706 to 9106942 2236 - pseudogene predicted gene, 18722
Tssr137017 16 9133175 to 9133191 16 + TSS region transcription start site region 137017
Tssr137018 16 9133265 to 9133277 12 + TSS region transcription start site region 137018
Tssr137019 16 9133295 to 9133310 15 + TSS region transcription start site region 137019
Tssr139885 16 9150855 to 9150859 4 - TSS region transcription start site region 139885
Gm49451 16 9158770 to 9162334 3564 + lincRNA gene predicted gene, 49451