Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:87596410-87726442

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22 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm41485 16 87602429 to 87616283 13854 - lncRNA gene predicted gene, 41485
Tssr141943 16 87612339 to 87612350 11 - TSS region transcription start site region 141943
Tssr141944 16 87612559 to 87612564 5 - TSS region transcription start site region 141944
Gm22808 16 87621014 to 87621120 106 - snRNA gene predicted gene, 22808
Tssr141945 16 87634947 to 87634952 5 - TSS region transcription start site region 141945
Tssr141946 16 87654291 to 87654298 7 - TSS region transcription start site region 141946
Tssr139226 16 87661410 to 87661442 32 + TSS region transcription start site region 139226
D16Ium41 16 87665620 to 87665833 213 DNA segment DNA segment, Chr 16, Indiana University Medical 41
Tssr139227 16 87692462 to 87692463 1 + TSS region transcription start site region 139227
Cpgi8400 16 87698496 to 87699583 1087 CpG island CpG island 8400
Tssr139228 16 87698904 to 87698959 55 + TSS region transcription start site region 139228
Bach1 16 87698954 to 87733346 34392 + protein coding gene BTB and CNC homology 1, basic leucine zipper transcription factor 1
Tssr139229 16 87698961 to 87698984 23 + TSS region transcription start site region 139229
Tssr139230 16 87698992 to 87699034 42 + TSS region transcription start site region 139230
Tssr139231 16 87699054 to 87699058 4 + TSS region transcription start site region 139231
Tssr141947 16 87700056 to 87700066 10 - TSS region transcription start site region 141947
Tssr139232 16 87700155 to 87700168 13 + TSS region transcription start site region 139232
Tssr139233 16 87700200 to 87700213 13 + TSS region transcription start site region 139233
Tssr139234 16 87719115 to 87719164 49 + TSS region transcription start site region 139234
Tssr139235 16 87720900 to 87720905 5 + TSS region transcription start site region 139235
Cpgi8401 16 87721229 to 87721413 184 CpG island CpG island 8401
Cpgi8402 16 87725898 to 87726206 308 CpG island CpG island 8402