Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:87020837-87466693

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28 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm38477 16 87000938 to 87049283 48345 - lincRNA gene predicted gene, 38477
Tssr141930 16 87049255 to 87049264 9 - TSS region transcription start site region 141930
Gm32865 16 87125036 to 87128439 3403 - lincRNA gene predicted gene, 32865
Tssr141931 16 87128417 to 87128467 50 - TSS region transcription start site region 141931
Gm41484 16 87240837 to 87246693 5856 - lncRNA gene predicted gene, 41484
Cpgi8393 16 87246289 to 87246597 308 CpG island CpG island 8393
D16Mit69 16 87285438 to 87285514 76 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 69
Tssr139216 16 87304050 to 87304058 8 + TSS region transcription start site region 139216
Cpgi8394 16 87354037 to 87354595 558 CpG island CpG island 8394
Tssr141932 16 87354176 to 87354184 8 - TSS region transcription start site region 141932
N6amt1 16 87354185 to 87368649 14464 + protein coding gene N-6 adenine-specific DNA methyltransferase 1 (putative)
Tssr139217 16 87354204 to 87354249 45 + TSS region transcription start site region 139217
Ltn1 16 87376651 to 87432612 55961 - protein coding gene listerin E3 ubiquitin protein ligase 1
Gm25896 16 87418909 to 87419044 135 - snoRNA gene predicted gene, 25896
Cpgi8395 16 87431953 to 87432785 832 CpG island CpG island 8395
Tssr141933 16 87432484 to 87432548 64 - TSS region transcription start site region 141933
Tssr141934 16 87432597 to 87432613 16 - TSS region transcription start site region 141934
Rwdd2b 16 87433407 to 87440573 7166 - protein coding gene RWD domain containing 2B
Cpgi8396 16 87437106 to 87437368 262 CpG island CpG island 8396
Cpgi8397 16 87440136 to 87440761 625 CpG island CpG island 8397
Tssr141935 16 87440498 to 87440542 44 - TSS region transcription start site region 141935
Tssr141936 16 87440551 to 87440612 61 - TSS region transcription start site region 141936
Tssr139218 16 87440602 to 87440637 35 + TSS region transcription start site region 139218
Tssr141937 16 87443216 to 87443220 4 - TSS region transcription start site region 141937
Usp16 16 87454708 to 87483515 28807 + protein coding gene ubiquitin specific peptidase 16
Cpgi8398 16 87454750 to 87455689 939 CpG island CpG island 8398
Tssr139219 16 87454976 to 87454987 11 + TSS region transcription start site region 139219
Tssr139220 16 87454992 to 87455057 65 + TSS region transcription start site region 139220