Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:8674972-9895565

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60 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr137001 16 8680758 to 8680790 32 + TSS region transcription start site region 137001
Gm5767 16 8680770 to 8683911 3141 + protein coding gene predicted gene 5767
Tssr137002 16 8680791 to 8680794 3 + TSS region transcription start site region 137002
Tssr137003 16 8680811 to 8680817 6 + TSS region transcription start site region 137003
Tssr139871 16 8682743 to 8682751 8 - TSS region transcription start site region 139871
Tssr137004 16 8682871 to 8682879 8 + TSS region transcription start site region 137004
Usp7 16 8688722 to 8757067 68345 - protein coding gene ubiquitin specific peptidase 7
Tssr139872 16 8695061 to 8695064 3 - TSS region transcription start site region 139872
Tssr139873 16 8721666 to 8721690 24 - TSS region transcription start site region 139873
Tssr139874 16 8721696 to 8721699 3 - TSS region transcription start site region 139874
Tssr139875 16 8721712 to 8721717 5 - TSS region transcription start site region 139875
Cpgi7942 16 8737516 to 8739432 1916 CpG island CpG island 7942
Tssr139876 16 8737733 to 8737741 8 - TSS region transcription start site region 139876
Tssr139877 16 8738884 to 8738895 11 - TSS region transcription start site region 139877
Tssr139878 16 8738899 to 8738952 53 - TSS region transcription start site region 139878
Tssr139879 16 8738961 to 8738975 14 - TSS region transcription start site region 139879
Gm25805 16 8766169 to 8766276 107 - snRNA gene predicted gene, 25805
Tssr137005 16 8770600 to 8770610 10 + TSS region transcription start site region 137005
Tssr139880 16 8783378 to 8783402 24 - TSS region transcription start site region 139880
Tssr139881 16 8792302 to 8792326 24 - TSS region transcription start site region 139881
Tssr139882 16 8792331 to 8792348 17 - TSS region transcription start site region 139882
Tssr139883 16 8792366 to 8792377 11 - TSS region transcription start site region 139883
Tssr139884 16 8823808 to 8823826 18 - TSS region transcription start site region 139884
Cpgi7943 16 8829109 to 8831508 2399 CpG island CpG island 7943
Tssr137006 16 8829996 to 8830021 25 + TSS region transcription start site region 137006
Tssr137007 16 8830037 to 8830058 21 + TSS region transcription start site region 137007
Tssr137008 16 8830093 to 8830104 11 + TSS region transcription start site region 137008
1810013L24Rik 16 8830100 to 8858922 28822 + protein coding gene RIKEN cDNA 1810013L24 gene
Tssr137009 16 8830115 to 8830142 27 + TSS region transcription start site region 137009
Tssr137010 16 8831096 to 8831110 14 + TSS region transcription start site region 137010
Tssr137011 16 8835964 to 8835970 6 + TSS region transcription start site region 137011
Tssr137012 16 8837762 to 8837766 4 + TSS region transcription start site region 137012
Tssr137013 16 8839526 to 8839529 3 + TSS region transcription start site region 137013
Tssr137014 16 8850813 to 8850817 4 + TSS region transcription start site region 137014
Tssr137015 16 8856993 to 8857000 7 + TSS region transcription start site region 137015
Gm22224 16 8873079 to 8873171 92 - rRNA gene predicted gene, 22224
Gm30310 16 8881614 to 8896050 14436 + lncRNA gene predicted gene, 30310
Gm10247 16 8922060 to 8922389 329 - pseudogene predicted gene 10247
Tssr137016 16 8944889 to 8944910 21 + TSS region transcription start site region 137016
Gm30371 16 8961301 to 8969900 8599 + lincRNA gene predicted gene, 30371
Gm49447 16 8996088 to 8996396 308 - pseudogene predicted gene, 49447
Gm30444 16 8997527 to 9007239 9712 + lncRNA gene predicted gene, 30444
Cpgi7944 16 9009512 to 9009694 182 CpG island CpG island 7944
Gm30567 16 9054647 to 9055420 773 + lincRNA gene predicted gene, 30567
D16Mit162 16 9062913 to 9063031 118 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 162
Gm49448 16 9079396 to 9137444 58048 + lincRNA gene predicted gene, 49448
Gm18722 16 9104706 to 9106942 2236 - pseudogene predicted gene, 18722
Tssr137017 16 9133175 to 9133191 16 + TSS region transcription start site region 137017
Tssr137018 16 9133265 to 9133277 12 + TSS region transcription start site region 137018
Tssr137019 16 9133295 to 9133310 15 + TSS region transcription start site region 137019
Tssr139885 16 9150855 to 9150859 4 - TSS region transcription start site region 139885
Gm49451 16 9158770 to 9162334 3564 + lincRNA gene predicted gene, 49451
Gm41418 16 9279972 to 9290565 10593 + lncRNA gene predicted gene, 41418
D16Mit109 16 9482993 to 9483122 129 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 109
Tssr139886 16 9570987 to 9570994 7 - TSS region transcription start site region 139886
Tssr139887 16 9571969 to 9571970 1 - TSS region transcription start site region 139887
Grin2a 16 9577039 to 9996500 419461 - protein coding gene glutamate receptor, ionotropic, NMDA2A (epsilon 1)
D16Mit87 16 9812751 to 9812884 133 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 87
Gm19143 16 9819893 to 9820568 675 + pseudogene predicted gene, 19143
Tssr139888 16 9895029 to 9895043 14 - TSS region transcription start site region 139888