Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:8653079-9093171

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57 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Pmm2 16 8637707 to 8657549 19842 + protein coding gene phosphomannomutase 2
Carhsp1 16 8658580 to 8672153 13573 - protein coding gene calcium regulated heat stable protein 1
Tssr139863 16 8660613 to 8660637 24 - TSS region transcription start site region 139863
Tssr139864 16 8666487 to 8666496 9 - TSS region transcription start site region 139864
Tssr139865 16 8666504 to 8666520 16 - TSS region transcription start site region 139865
Tssr139866 16 8666521 to 8666558 37 - TSS region transcription start site region 139866
Tssr139867 16 8667410 to 8667415 5 - TSS region transcription start site region 139867
Cpgi7941 16 8671506 to 8672514 1008 CpG island CpG island 7941
Tssr139868 16 8671593 to 8671606 13 - TSS region transcription start site region 139868
Tssr139869 16 8672145 to 8672161 16 - TSS region transcription start site region 139869
Tssr139870 16 8672163 to 8672186 23 - TSS region transcription start site region 139870
Tssr137001 16 8680758 to 8680790 32 + TSS region transcription start site region 137001
Gm5767 16 8680770 to 8683911 3141 + protein coding gene predicted gene 5767
Tssr137002 16 8680791 to 8680794 3 + TSS region transcription start site region 137002
Tssr137003 16 8680811 to 8680817 6 + TSS region transcription start site region 137003
Tssr139871 16 8682743 to 8682751 8 - TSS region transcription start site region 139871
Tssr137004 16 8682871 to 8682879 8 + TSS region transcription start site region 137004
Usp7 16 8688722 to 8757067 68345 - protein coding gene ubiquitin specific peptidase 7
Tssr139872 16 8695061 to 8695064 3 - TSS region transcription start site region 139872
Tssr139873 16 8721666 to 8721690 24 - TSS region transcription start site region 139873
Tssr139874 16 8721696 to 8721699 3 - TSS region transcription start site region 139874
Tssr139875 16 8721712 to 8721717 5 - TSS region transcription start site region 139875
Cpgi7942 16 8737516 to 8739432 1916 CpG island CpG island 7942
Tssr139876 16 8737733 to 8737741 8 - TSS region transcription start site region 139876
Tssr139877 16 8738884 to 8738895 11 - TSS region transcription start site region 139877
Tssr139878 16 8738899 to 8738952 53 - TSS region transcription start site region 139878
Tssr139879 16 8738961 to 8738975 14 - TSS region transcription start site region 139879
Gm25805 16 8766169 to 8766276 107 - snRNA gene predicted gene, 25805
Tssr137005 16 8770600 to 8770610 10 + TSS region transcription start site region 137005
Tssr139880 16 8783378 to 8783402 24 - TSS region transcription start site region 139880
Tssr139881 16 8792302 to 8792326 24 - TSS region transcription start site region 139881
Tssr139882 16 8792331 to 8792348 17 - TSS region transcription start site region 139882
Tssr139883 16 8792366 to 8792377 11 - TSS region transcription start site region 139883
Tssr139884 16 8823808 to 8823826 18 - TSS region transcription start site region 139884
Cpgi7943 16 8829109 to 8831508 2399 CpG island CpG island 7943
Tssr137006 16 8829996 to 8830021 25 + TSS region transcription start site region 137006
Tssr137007 16 8830037 to 8830058 21 + TSS region transcription start site region 137007
Tssr137008 16 8830093 to 8830104 11 + TSS region transcription start site region 137008
1810013L24Rik 16 8830100 to 8858922 28822 + protein coding gene RIKEN cDNA 1810013L24 gene
Tssr137009 16 8830115 to 8830142 27 + TSS region transcription start site region 137009
Tssr137010 16 8831096 to 8831110 14 + TSS region transcription start site region 137010
Tssr137011 16 8835964 to 8835970 6 + TSS region transcription start site region 137011
Tssr137012 16 8837762 to 8837766 4 + TSS region transcription start site region 137012
Tssr137013 16 8839526 to 8839529 3 + TSS region transcription start site region 137013
Tssr137014 16 8850813 to 8850817 4 + TSS region transcription start site region 137014
Tssr137015 16 8856993 to 8857000 7 + TSS region transcription start site region 137015
Gm22224 16 8873079 to 8873171 92 - rRNA gene predicted gene, 22224
Gm30310 16 8881614 to 8896050 14436 + lncRNA gene predicted gene, 30310
Gm10247 16 8922060 to 8922389 329 - pseudogene predicted gene 10247
Tssr137016 16 8944889 to 8944910 21 + TSS region transcription start site region 137016
Gm30371 16 8961301 to 8969900 8599 + lincRNA gene predicted gene, 30371
Gm49447 16 8996088 to 8996396 308 - pseudogene predicted gene, 49447
Gm30444 16 8997527 to 9007239 9712 + lncRNA gene predicted gene, 30444
Cpgi7944 16 9009512 to 9009694 182 CpG island CpG island 7944
Gm30567 16 9054647 to 9055420 773 + lincRNA gene predicted gene, 30567
D16Mit162 16 9062913 to 9063031 118 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 162
Gm49448 16 9079396 to 9137444 58048 + lincRNA gene predicted gene, 49448