Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:85857908-87087915

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44 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Adamts5 16 85858157 to 85901125 42968 - protein coding gene a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 5 (aggrecanase-2)
Cpgi8391 16 85899231 to 85900472 1241 CpG island CpG island 8391
Tssr141913 16 85899334 to 85899356 22 - TSS region transcription start site region 141913
Gm46558 16 85899909 to 85905197 5288 + lncRNA gene predicted gene, 46558
Tssr141914 16 85900230 to 85900252 22 - TSS region transcription start site region 141914
Tssr141915 16 85900265 to 85900280 15 - TSS region transcription start site region 141915
Tssr141916 16 85900294 to 85900309 15 - TSS region transcription start site region 141916
Tssr141917 16 85900603 to 85900633 30 - TSS region transcription start site region 141917
Cpgi8392 16 85900631 to 85901310 679 CpG island CpG island 8392
Tssr141918 16 85900681 to 85900691 10 - TSS region transcription start site region 141918
Tssr141919 16 85900719 to 85900745 26 - TSS region transcription start site region 141919
Tssr141920 16 85901056 to 85901071 15 - TSS region transcription start site region 141920
Tssr141921 16 85901118 to 85901133 15 - TSS region transcription start site region 141921
Tssr141922 16 85901347 to 85901362 15 - TSS region transcription start site region 141922
Tssr141923 16 85901792 to 85901828 36 - TSS region transcription start site region 141923
Gm49570 16 86015455 to 86015857 402 + pseudogene predicted gene, 49570
Tssr139212 16 86044973 to 86044984 11 + TSS region transcription start site region 139212
1700007H22Rik 16 86139304 to 86150676 11372 - lincRNA gene RIKEN cDNA 1700007H22 gene
D16Mit70 16 86209075 to 86209261 186 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 70
Gm32357 16 86236171 to 86269150 32979 + lincRNA gene predicted gene, 32357
D16Mit224 16 86279244 to 86279466 222 DNA segment DNA Segment, Chr 16, Massachusetts Institute of Technology 224
Tauph 16 86279244 to 86279466 222 QTL tau phosphorylation
D16Mit94 16 86289850 to 86289972 122 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 94
Tssr4948 16 86303104 to 86303105 1 + TSS region transcription start site region 4948
D16Mit7 16 86330723 to 86330883 160 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 7
Lmr18a 16 86330723 to 86330883 160 QTL leishmaniasis resistance 18a
Lmr18b 16 86330723 to 86330883 160 QTL leishmaniasis resistance 18b
Lmr18 16 86330723 to 86330883 160 QTL leishmaniasis resistance 18
Tssr139213 16 86343069 to 86343073 4 + TSS region transcription start site region 139213
Tssr141924 16 86358191 to 86358197 6 - TSS region transcription start site region 141924
Cocia19 16 86457594 to 86457594 0 QTL cocaine-induced activity, QTL 19
Tssr141925 16 86472908 to 86472915 7 - TSS region transcription start site region 141925
Gm49572 16 86758899 to 86759376 477 + pseudogene predicted gene, 49572
Gm32461 16 86770227 to 86806513 36286 - lincRNA gene predicted gene, 32461
Tssr141926 16 86805521 to 86805538 17 - TSS region transcription start site region 141926
Tssr141927 16 86806358 to 86806368 10 - TSS region transcription start site region 141927
Tssr141928 16 86806507 to 86806520 13 - TSS region transcription start site region 141928
Tssr141929 16 86808802 to 86808825 23 - TSS region transcription start site region 141929
Tssr139214 16 86816885 to 86816902 17 + TSS region transcription start site region 139214
Tssr139215 16 86816904 to 86816920 16 + TSS region transcription start site region 139215
Gm32624 16 86816914 to 86877360 60446 + lincRNA gene predicted gene, 32624
Gm25715 16 86845470 to 86845594 124 + snoRNA gene predicted gene, 25715
Gm38477 16 87000938 to 87049283 48345 - lincRNA gene predicted gene, 38477
Tssr141930 16 87049255 to 87049264 9 - TSS region transcription start site region 141930