MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 16:85300153-85800177

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17 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Gm41483	16	85323353 to 85377668	54315	+	lncRNA gene	predicted gene, 41483
D16Mit179	16	85367403 to 85367541	138		DNA segment	DNA segment, Chr 16, Massachusetts Institute of Technology 179
Cyyr1	16	85452858 to 85550905	98047	-	protein coding gene	cysteine and tyrosine-rich protein 1
Tssr141902	16	85455123 to 85455127	4	-	TSS region	transcription start site region 141902
Tssr141903	16	85456775 to 85456786	11	-	TSS region	transcription start site region 141903
Tssr141904	16	85494348 to 85494350	2	-	TSS region	transcription start site region 141904
Tssr141905	16	85497270 to 85497274	4	-	TSS region	transcription start site region 141905
Tssr141906	16	85542582 to 85542590	8	-	TSS region	transcription start site region 141906
Tssr139209	16	85546997 to 85547007	10	+	TSS region	transcription start site region 139209
Cpgi8389	16	85550051 to 85550337	286		CpG island	CpG island 8389
Tssr141907	16	85550153 to 85550177	24	-	TSS region	transcription start site region 141907
Tssr4947	16	85550314 to 85550317	3	-	TSS region	transcription start site region 4947
Tssr141908	16	85550386 to 85550402	16	-	TSS region	transcription start site region 141908
Tssr141909	16	85550424 to 85550432	8	-	TSS region	transcription start site region 141909
Gm2541	16	85553236 to 85553943	707	-	pseudogene	predicted pseudogene 2541
Gm6278	16	85644252 to 85645023	771	+	pseudogene	predicted gene 6278
Adamts1	16	85793827 to 85803113	9286	-	protein coding gene	a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 1