Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:85130123-85780127

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31 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Del(16Hspa13-App)3Yah 16 75755190 to 85173952 9418762 cytogenetic marker deletion, Chr 16, Yann Herault 3
Dp(16Hspa13-App)2Yah 16 75755190 to 85173952 9418762 chromosomal duplication duplication, Chr 16, Yann Herault 2
App 16 84952666 to 85173952 221286 - protein coding gene amyloid beta (A4) precursor protein
Tssr139207 16 85132407 to 85132453 46 + TSS region transcription start site region 139207
Tssr4946 16 85139362 to 85139369 7 - TSS region transcription start site region 4946
Tssr141897 16 85141232 to 85141269 37 - TSS region transcription start site region 141897
Gm49226 16 85148829 to 85155274 6445 + antisense lncRNA gene predicted gene, 49226
Tssr139208 16 85152776 to 85152794 18 + TSS region transcription start site region 139208
Tssr141898 16 85163037 to 85163041 4 - TSS region transcription start site region 141898
Tssr141899 16 85163695 to 85163718 23 - TSS region transcription start site region 141899
Gm27295 16 85168849 to 85169001 152 + snoRNA gene predicted gene, 27295
Cpgi8388 16 85172400 to 85174139 1739 CpG island CpG island 8388
Tssr141900 16 85173692 to 85173718 26 - TSS region transcription start site region 141900
Tssr141901 16 85173729 to 85173747 18 - TSS region transcription start site region 141901
Gm41482 16 85215379 to 85217530 2151 + lncRNA gene predicted gene, 41482
Gm41483 16 85323353 to 85377668 54315 + lncRNA gene predicted gene, 41483
D16Mit179 16 85367403 to 85367541 138 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 179
Cyyr1 16 85452858 to 85550905 98047 - protein coding gene cysteine and tyrosine-rich protein 1
Tssr141902 16 85455123 to 85455127 4 - TSS region transcription start site region 141902
Tssr141903 16 85456775 to 85456786 11 - TSS region transcription start site region 141903
Tssr141904 16 85494348 to 85494350 2 - TSS region transcription start site region 141904
Tssr141905 16 85497270 to 85497274 4 - TSS region transcription start site region 141905
Tssr141906 16 85542582 to 85542590 8 - TSS region transcription start site region 141906
Tssr139209 16 85546997 to 85547007 10 + TSS region transcription start site region 139209
Cpgi8389 16 85550051 to 85550337 286 CpG island CpG island 8389
Tssr141907 16 85550153 to 85550177 24 - TSS region transcription start site region 141907
Tssr4947 16 85550314 to 85550317 3 - TSS region transcription start site region 4947
Tssr141908 16 85550386 to 85550402 16 - TSS region transcription start site region 141908
Tssr141909 16 85550424 to 85550432 8 - TSS region transcription start site region 141909
Gm2541 16 85553236 to 85553943 707 - pseudogene predicted pseudogene 2541
Gm6278 16 85644252 to 85645023 771 + pseudogene predicted gene 6278