MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 16:85102776-85202794

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17 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Del(16Hspa13-App)3Yah	16	75755190 to 85173952	9418762		cytogenetic marker	deletion, Chr 16, Yann Herault 3
Dp(16Hspa13-App)2Yah	16	75755190 to 85173952	9418762		chromosomal duplication	duplication, Chr 16, Yann Herault 2
App	16	84952666 to 85173952	221286	-	protein coding gene	amyloid beta (A4) precursor protein
Tssr141894	16	85103325 to 85103341	16	-	TSS region	transcription start site region 141894
Tssr141895	16	85120572 to 85120602	30	-	TSS region	transcription start site region 141895
Tssr141896	16	85123834 to 85123839	5	-	TSS region	transcription start site region 141896
Tssr139207	16	85132407 to 85132453	46	+	TSS region	transcription start site region 139207
Tssr4946	16	85139362 to 85139369	7	-	TSS region	transcription start site region 4946
Tssr141897	16	85141232 to 85141269	37	-	TSS region	transcription start site region 141897
Gm49226	16	85148829 to 85155274	6445	+	antisense lncRNA gene	predicted gene, 49226
Tssr139208	16	85152776 to 85152794	18	+	TSS region	transcription start site region 139208
Tssr141898	16	85163037 to 85163041	4	-	TSS region	transcription start site region 141898
Tssr141899	16	85163695 to 85163718	23	-	TSS region	transcription start site region 141899
Gm27295	16	85168849 to 85169001	152	+	snoRNA gene	predicted gene, 27295
Cpgi8388	16	85172400 to 85174139	1739		CpG island	CpG island 8388
Tssr141900	16	85173692 to 85173718	26	-	TSS region	transcription start site region 141900
Tssr141901	16	85173729 to 85173747	18	-	TSS region	transcription start site region 141901