Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:85090379-85342530

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19 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Del(16Hspa13-App)3Yah 16 75755190 to 85173952 9418762 cytogenetic marker deletion, Chr 16, Yann Herault 3
Dp(16Hspa13-App)2Yah 16 75755190 to 85173952 9418762 chromosomal duplication duplication, Chr 16, Yann Herault 2
App 16 84952666 to 85173952 221286 - protein coding gene amyloid beta (A4) precursor protein
Tssr141894 16 85103325 to 85103341 16 - TSS region transcription start site region 141894
Tssr141895 16 85120572 to 85120602 30 - TSS region transcription start site region 141895
Tssr141896 16 85123834 to 85123839 5 - TSS region transcription start site region 141896
Tssr139207 16 85132407 to 85132453 46 + TSS region transcription start site region 139207
Tssr4946 16 85139362 to 85139369 7 - TSS region transcription start site region 4946
Tssr141897 16 85141232 to 85141269 37 - TSS region transcription start site region 141897
Gm49226 16 85148829 to 85155274 6445 + antisense lncRNA gene predicted gene, 49226
Tssr139208 16 85152776 to 85152794 18 + TSS region transcription start site region 139208
Tssr141898 16 85163037 to 85163041 4 - TSS region transcription start site region 141898
Tssr141899 16 85163695 to 85163718 23 - TSS region transcription start site region 141899
Gm27295 16 85168849 to 85169001 152 + snoRNA gene predicted gene, 27295
Cpgi8388 16 85172400 to 85174139 1739 CpG island CpG island 8388
Tssr141900 16 85173692 to 85173718 26 - TSS region transcription start site region 141900
Tssr141901 16 85173729 to 85173747 18 - TSS region transcription start site region 141901
Gm41482 16 85215379 to 85217530 2151 + lncRNA gene predicted gene, 41482
Gm41483 16 85323353 to 85377668 54315 + lncRNA gene predicted gene, 41483