Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:84835415-85075438

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29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Atp5j 16 84827871 to 84835625 7754 - protein coding gene ATP synthase, H+ transporting, mitochondrial F0 complex, subunit F
Cpgi8385 16 84834434 to 84836243 1809 CpG island CpG island 8385
Gabpa 16 84834925 to 84863779 28854 + protein coding gene GA repeat binding protein, alpha
Tssr139201 16 84835360 to 84835421 61 + TSS region transcription start site region 139201
Tssr141876 16 84835463 to 84835481 18 - TSS region transcription start site region 141876
Tssr141877 16 84835484 to 84835534 50 - TSS region transcription start site region 141877
Tssr141878 16 84835557 to 84835617 60 - TSS region transcription start site region 141878
Tssr141879 16 84835626 to 84835635 9 - TSS region transcription start site region 141879
Tssr141880 16 84835655 to 84835669 14 - TSS region transcription start site region 141880
Tssr139202 16 84852610 to 84852619 9 + TSS region transcription start site region 139202
Tssr139203 16 84852891 to 84852897 6 + TSS region transcription start site region 139203
Cpgi8386 16 84875147 to 84875326 179 CpG island CpG island 8386
Gm49568 16 84892662 to 84893832 1170 - pseudogene predicted gene, 49568
D16Mit190 16 84911227 to 84911330 103 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 190
App 16 84952666 to 85173952 221286 - protein coding gene amyloid beta (A4) precursor protein
Del(16App-Runx1)5Yah 16 84952666 to 92826074 7873408 chromosomal deletion deletion, Chr 16, Yann Herault 5
Tssr141881 16 84955312 to 84955349 37 - TSS region transcription start site region 141881
Tssr141882 16 84955415 to 84955438 23 - TSS region transcription start site region 141882
Gm10791 16 84972214 to 84979451 7237 + antisense lncRNA gene predicted gene 10791
Tssr141883 16 84977944 to 84977957 13 - TSS region transcription start site region 141883
Tssr141884 16 84977970 to 84977985 15 - TSS region transcription start site region 141884
Gm49228 16 85021622 to 85022017 395 + pseudogene predicted gene, 49228
Tssr141885 16 85024887 to 85024931 44 - TSS region transcription start site region 141885
Tssr141886 16 85034398 to 85034401 3 - TSS region transcription start site region 141886
Tssr141887 16 85044106 to 85044110 4 - TSS region transcription start site region 141887
Tssr139204 16 85056371 to 85056391 20 + TSS region transcription start site region 139204
Tssr139205 16 85056398 to 85056448 50 + TSS region transcription start site region 139205
Tssr141888 16 85056409 to 85056426 17 - TSS region transcription start site region 141888
Tssr139206 16 85072069 to 85072101 32 + TSS region transcription start site region 139206