Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:84775070-84895097

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36 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi8384 16 84773926 to 84775232 1306 CpG island CpG island 8384
Jam2 16 84774123 to 84825928 51805 + protein coding gene junction adhesion molecule 2
Tssr141867 16 84783490 to 84783492 2 - TSS region transcription start site region 141867
Tssr139191 16 84783718 to 84783723 5 + TSS region transcription start site region 139191
Tssr139192 16 84793546 to 84793556 10 + TSS region transcription start site region 139192
Tssr139193 16 84793560 to 84793574 14 + TSS region transcription start site region 139193
Gm46557 16 84817278 to 84821253 3975 - lncRNA gene predicted gene, 46557
Gm25908 16 84818097 to 84818194 97 + rRNA gene predicted gene, 25908
Atp5j 16 84827871 to 84835625 7754 - protein coding gene ATP synthase, H+ transporting, mitochondrial F0 complex, subunit F
Tssr141868 16 84831786 to 84831799 13 - TSS region transcription start site region 141868
Cpgi8385 16 84834434 to 84836243 1809 CpG island CpG island 8385
Tssr141869 16 84834848 to 84834874 26 - TSS region transcription start site region 141869
Tssr141870 16 84834876 to 84834885 9 - TSS region transcription start site region 141870
Tssr139194 16 84834880 to 84834887 7 + TSS region transcription start site region 139194
Tssr139195 16 84834901 to 84834941 40 + TSS region transcription start site region 139195
Gabpa 16 84834925 to 84863779 28854 + protein coding gene GA repeat binding protein, alpha
Tssr139196 16 84834943 to 84834955 12 + TSS region transcription start site region 139196
Tssr141871 16 84834964 to 84834976 12 - TSS region transcription start site region 141871
Tssr141872 16 84834979 to 84835015 36 - TSS region transcription start site region 141872
Tssr139197 16 84835043 to 84835056 13 + TSS region transcription start site region 139197
Tssr139198 16 84835070 to 84835097 27 + TSS region transcription start site region 139198
Tssr141873 16 84835269 to 84835294 25 - TSS region transcription start site region 141873
Tssr141874 16 84835295 to 84835311 16 - TSS region transcription start site region 141874
Tssr139199 16 84835325 to 84835339 14 + TSS region transcription start site region 139199
Tssr141875 16 84835326 to 84835336 10 - TSS region transcription start site region 141875
Tssr139200 16 84835340 to 84835351 11 + TSS region transcription start site region 139200
Tssr139201 16 84835360 to 84835421 61 + TSS region transcription start site region 139201
Tssr141876 16 84835463 to 84835481 18 - TSS region transcription start site region 141876
Tssr141877 16 84835484 to 84835534 50 - TSS region transcription start site region 141877
Tssr141878 16 84835557 to 84835617 60 - TSS region transcription start site region 141878
Tssr141879 16 84835626 to 84835635 9 - TSS region transcription start site region 141879
Tssr141880 16 84835655 to 84835669 14 - TSS region transcription start site region 141880
Tssr139202 16 84852610 to 84852619 9 + TSS region transcription start site region 139202
Tssr139203 16 84852891 to 84852897 6 + TSS region transcription start site region 139203
Cpgi8386 16 84875147 to 84875326 179 CpG island CpG island 8386
Gm49568 16 84892662 to 84893832 1170 - pseudogene predicted gene, 49568