Gene symbol | Chromo- some |
Coordinates (bp, mm10) | Size (bp) | Strand | Feature Type | Gene name |
---|---|---|---|---|---|---|
Bwtn1 | 16 | 65603359 | QTL | body weight at necropsy 1 | ||
Dp(16Hspa13-App)2Yah | 16 | 9418762 | chromosomal duplication | duplication, Chr 16, Yann Herault 2 | ||
Del(16Hspa13-App)3Yah | 16 | 9418762 | cytogenetic marker | deletion, Chr 16, Yann Herault 3 | ||
Tssr141866 | 16 | 29 | - | TSS region | transcription start site region 141866 | |
Tssr139177 | 16 | 5 | + | TSS region | transcription start site region 139177 | |
Tssr139178 | 16 | 3 | + | TSS region | transcription start site region 139178 | |
Tssr139179 | 16 | 20 | + | TSS region | transcription start site region 139179 | |
Tssr139180 | 16 | 14 | + | TSS region | transcription start site region 139180 | |
Cpgi8384 | 16 | 1306 | CpG island | CpG island 8384 | ||
Tssr139181 | 16 | 7 | + | TSS region | transcription start site region 139181 | |
Jam2 | 16 | 51805 | + | protein coding gene | junction adhesion molecule 2 | |
Tssr139182 | 16 | 9 | + | TSS region | transcription start site region 139182 | |
Tssr139183 | 16 | 11 | + | TSS region | transcription start site region 139183 | |
Tssr139184 | 16 | 22 | + | TSS region | transcription start site region 139184 | |
Tssr139185 | 16 | 9 | + | TSS region | transcription start site region 139185 | |
Tssr139186 | 16 | 31 | + | TSS region | transcription start site region 139186 | |
Tssr139187 | 16 | 13 | + | TSS region | transcription start site region 139187 | |
Tssr139188 | 16 | 11 | + | TSS region | transcription start site region 139188 | |
Tssr139189 | 16 | 62 | + | TSS region | transcription start site region 139189 | |
Tssr139190 | 16 | 11 | + | TSS region | transcription start site region 139190 | |
Tssr141867 | 16 | 2 | - | TSS region | transcription start site region 141867 | |
Tssr139191 | 16 | 5 | + | TSS region | transcription start site region 139191 | |
Tssr139192 | 16 | 10 | + | TSS region | transcription start site region 139192 | |
Tssr139193 | 16 | 14 | + | TSS region | transcription start site region 139193 | |
Gm46557 | 16 | 3975 | - | lncRNA gene | predicted gene, 46557 | |
Gm25908 | 16 | 97 | + | rRNA gene | predicted gene, 25908 | |
Atp5j | 16 | 7754 | - | protein coding gene | ATP synthase, H+ transporting, mitochondrial F0 complex, subunit F | |
Tssr141868 | 16 | 13 | - | TSS region | transcription start site region 141868 | |
Cpgi8385 | 16 | 1809 | CpG island | CpG island 8385 | ||
Tssr141869 | 16 | 26 | - | TSS region | transcription start site region 141869 | |
Tssr141870 | 16 | 9 | - | TSS region | transcription start site region 141870 | |
Tssr139194 | 16 | 7 | + | TSS region | transcription start site region 139194 | |
Tssr139195 | 16 | 40 | + | TSS region | transcription start site region 139195 | |
Gabpa | 16 | 28854 | + | protein coding gene | GA repeat binding protein, alpha | |
Tssr139196 | 16 | 12 | + | TSS region | transcription start site region 139196 | |
Tssr141871 | 16 | 12 | - | TSS region | transcription start site region 141871 | |
Tssr141872 | 16 | 36 | - | TSS region | transcription start site region 141872 | |
Tssr139197 | 16 | 13 | + | TSS region | transcription start site region 139197 | |
Tssr139198 | 16 | 27 | + | TSS region | transcription start site region 139198 | |
Tssr141873 | 16 | 25 | - | TSS region | transcription start site region 141873 | |
Tssr141874 | 16 | 16 | - | TSS region | transcription start site region 141874 | |
Tssr139199 | 16 | 14 | + | TSS region | transcription start site region 139199 | |
Tssr141875 | 16 | 10 | - | TSS region | transcription start site region 141875 | |
Tssr139200 | 16 | 11 | + | TSS region | transcription start site region 139200 | |
Tssr139201 | 16 | 61 | + | TSS region | transcription start site region 139201 | |
Tssr141876 | 16 | 18 | - | TSS region | transcription start site region 141876 | |
Tssr141877 | 16 | 50 | - | TSS region | transcription start site region 141877 | |
Tssr141878 | 16 | 60 | - | TSS region | transcription start site region 141878 | |
Tssr141879 | 16 | 9 | - | TSS region | transcription start site region 141879 | |
Tssr141880 | 16 | 14 | - | TSS region | transcription start site region 141880 | |
Tssr139202 | 16 | 9 | + | TSS region | transcription start site region 139202 | |
Tssr139203 | 16 | 6 | + | TSS region | transcription start site region 139203 | |
Cpgi8386 | 16 | 179 | CpG island | CpG island 8386 | ||
Gm49568 | 16 | 1170 | - | pseudogene | predicted gene, 49568 | |
D16Mit190 | 16 | 103 | DNA segment | DNA segment, Chr 16, Massachusetts Institute of Technology 190 | ||
App | 16 | 221286 | - | protein coding gene | amyloid beta (A4) precursor protein | |
Del(16App-Runx1)5Yah | 16 | 7873408 | chromosomal deletion | deletion, Chr 16, Yann Herault 5 | ||
Tssr141881 | 16 | 37 | - | TSS region | transcription start site region 141881 | |
Tssr141882 | 16 | 23 | - | TSS region | transcription start site region 141882 | |
Gm10791 | 16 | 7237 | + | antisense lncRNA gene | predicted gene 10791 | |
Tssr141883 | 16 | 13 | - | TSS region | transcription start site region 141883 | |
Tssr141884 | 16 | 15 | - | TSS region | transcription start site region 141884 | |
Gm49228 | 16 | 395 | + | pseudogene | predicted gene, 49228 | |
Tssr141885 | 16 | 44 | - | TSS region | transcription start site region 141885 | |
Tssr141886 | 16 | 3 | - | TSS region | transcription start site region 141886 | |
Tssr141887 | 16 | 4 | - | TSS region | transcription start site region 141887 | |
Tssr139204 | 16 | 20 | + | TSS region | transcription start site region 139204 | |
Tssr139205 | 16 | 50 | + | TSS region | transcription start site region 139205 | |
Tssr141888 | 16 | 17 | - | TSS region | transcription start site region 141888 | |
Tssr139206 | 16 | 32 | + | TSS region | transcription start site region 139206 | |
Cpgi8387 | 16 | 470 | CpG island | CpG island 8387 | ||
Tssr141889 | 16 | 15 | - | TSS region | transcription start site region 141889 | |
Tssr141890 | 16 | 15 | - | TSS region | transcription start site region 141890 | |
Tssr141891 | 16 | 15 | - | TSS region | transcription start site region 141891 | |
Tssr141892 | 16 | 20 | - | TSS region | transcription start site region 141892 | |
Gm49227 | 16 | 3281 | + | antisense lncRNA gene | predicted gene, 49227 | |
Tssr141893 | 16 | 22 | - | TSS region | transcription start site region 141893 | |
Tssr141894 | 16 | 16 | - | TSS region | transcription start site region 141894 | |
Tssr141895 | 16 | 30 | - | TSS region | transcription start site region 141895 | |
Tssr141896 | 16 | 5 | - | TSS region | transcription start site region 141896 | |
Tssr139207 | 16 | 46 | + | TSS region | transcription start site region 139207 | |
Tssr4946 | 16 | 7 | - | TSS region | transcription start site region 4946 | |
Tssr141897 | 16 | 37 | - | TSS region | transcription start site region 141897 | |
Gm49226 | 16 | 6445 | + | antisense lncRNA gene | predicted gene, 49226 | |
Tssr139208 | 16 | 18 | + | TSS region | transcription start site region 139208 | |
Tssr141898 | 16 | 4 | - | TSS region | transcription start site region 141898 | |
Tssr141899 | 16 | 23 | - | TSS region | transcription start site region 141899 | |
Gm27295 | 16 | 152 | + | snoRNA gene | predicted gene, 27295 | |
Cpgi8388 | 16 | 1739 | CpG island | CpG island 8388 | ||
Tssr141900 | 16 | 26 | - | TSS region | transcription start site region 141900 | |
Tssr141901 | 16 | 18 | - | TSS region | transcription start site region 141901 | |
Gm41482 | 16 | 2151 | + | lncRNA gene | predicted gene, 41482 | |
Gm41483 | 16 | 54315 | + | lncRNA gene | predicted gene, 41483 | |
D16Mit179 | 16 | 138 | DNA segment | DNA segment, Chr 16, Massachusetts Institute of Technology 179 | ||
Cyyr1 | 16 | 98047 | - | protein coding gene | cysteine and tyrosine-rich protein 1 | |
Tssr141902 | 16 | 4 | - | TSS region | transcription start site region 141902 | |
Tssr141903 | 16 | 11 | - | TSS region | transcription start site region 141903 | |
Tssr141904 | 16 | 2 | - | TSS region | transcription start site region 141904 | |
Tssr141905 | 16 | 4 | - | TSS region | transcription start site region 141905 | |
Tssr141906 | 16 | 8 | - | TSS region | transcription start site region 141906 | |
Tssr139209 | 16 | 10 | + | TSS region | transcription start site region 139209 | |
Cpgi8389 | 16 | 286 | CpG island | CpG island 8389 | ||
Tssr141907 | 16 | 24 | - | TSS region | transcription start site region 141907 | |
Tssr4947 | 16 | 3 | - | TSS region | transcription start site region 4947 | |
Tssr141908 | 16 | 16 | - | TSS region | transcription start site region 141908 | |
Tssr141909 | 16 | 8 | - | TSS region | transcription start site region 141909 | |
Gm2541 | 16 | 707 | - | pseudogene | predicted pseudogene 2541 | |
Gm6278 | 16 | 771 | + | pseudogene | predicted gene 6278 | |
Adamts1 | 16 | 9286 | - | protein coding gene | a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 1 | |
Cpgi8390 | 16 | 2235 | CpG island | CpG island 8390 | ||
Tssr141910 | 16 | 4 | - | TSS region | transcription start site region 141910 | |
Tssr141911 | 16 | 15 | - | TSS region | transcription start site region 141911 | |
D16Mit152 | 16 | 104 | DNA segment | DNA segment, Chr 16, Massachusetts Institute of Technology 152 | ||
Pgia10 | 16 | 104 | QTL | proteoglycan induced arthritis 10 | ||
Tssr141912 | 16 | 6 | - | TSS region | transcription start site region 141912 | |
4930556C24Rik | 16 | 7558 | + | lincRNA gene | RIKEN cDNA 4930556C24 gene | |
Tssr139210 | 16 | 5 | + | TSS region | transcription start site region 139210 | |
Tssr139211 | 16 | 11 | + | TSS region | transcription start site region 139211 | |
Adamts5 | 16 | 42968 | - | protein coding gene | a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 5 (aggrecanase-2) | |
Cpgi8391 | 16 | 1241 | CpG island | CpG island 8391 | ||
Tssr141913 | 16 | 22 | - | TSS region | transcription start site region 141913 | |
Gm46558 | 16 | 5288 | + | lncRNA gene | predicted gene, 46558 | |
Tssr141914 | 16 | 22 | - | TSS region | transcription start site region 141914 | |
Tssr141915 | 16 | 15 | - | TSS region | transcription start site region 141915 | |
Tssr141916 | 16 | 15 | - | TSS region | transcription start site region 141916 | |
Tssr141917 | 16 | 30 | - | TSS region | transcription start site region 141917 | |
Cpgi8392 | 16 | 679 | CpG island | CpG island 8392 | ||
Tssr141918 | 16 | 10 | - | TSS region | transcription start site region 141918 | |
Tssr141919 | 16 | 26 | - | TSS region | transcription start site region 141919 | |
Tssr141920 | 16 | 15 | - | TSS region | transcription start site region 141920 | |
Tssr141921 | 16 | 15 | - | TSS region | transcription start site region 141921 | |
Tssr141922 | 16 | 15 | - | TSS region | transcription start site region 141922 | |
Tssr141923 | 16 | 36 | - | TSS region | transcription start site region 141923 | |
Gm49570 | 16 | 402 | + | pseudogene | predicted gene, 49570 | |
Tssr139212 | 16 | 11 | + | TSS region | transcription start site region 139212 | |
1700007H22Rik | 16 | 11372 | - | lincRNA gene | RIKEN cDNA 1700007H22 gene | |
D16Mit70 | 16 | 186 | DNA segment | DNA segment, Chr 16, Massachusetts Institute of Technology 70 | ||
Gm32357 | 16 | 32979 | + | lincRNA gene | predicted gene, 32357 | |
Tauph | 16 | 222 | QTL | tau phosphorylation | ||
D16Mit224 | 16 | 222 | DNA segment | DNA Segment, Chr 16, Massachusetts Institute of Technology 224 | ||
D16Mit94 | 16 | 122 | DNA segment | DNA segment, Chr 16, Massachusetts Institute of Technology 94 | ||
Tssr4948 | 16 | 1 | + | TSS region | transcription start site region 4948 | |
Lmr18a | 16 | 160 | QTL | leishmaniasis resistance 18a | ||
Lmr18b | 16 | 160 | QTL | leishmaniasis resistance 18b | ||
Lmr18 | 16 | 160 | QTL | leishmaniasis resistance 18 | ||
D16Mit7 | 16 | 160 | DNA segment | DNA segment, Chr 16, Massachusetts Institute of Technology 7 | ||
Tssr139213 | 16 | 4 | + | TSS region | transcription start site region 139213 | |
Tssr141924 | 16 | 6 | - | TSS region | transcription start site region 141924 | |
Cocia19 | 16 | 0 | QTL | cocaine-induced activity, QTL 19 | ||
Tssr141925 | 16 | 7 | - | TSS region | transcription start site region 141925 | |
Gm49572 | 16 | 477 | + | pseudogene | predicted gene, 49572 | |
Gm32461 | 16 | 36286 | - | lincRNA gene | predicted gene, 32461 | |
Tssr141926 | 16 | 17 | - | TSS region | transcription start site region 141926 | |
Tssr141927 | 16 | 10 | - | TSS region | transcription start site region 141927 | |
Tssr141928 | 16 | 13 | - | TSS region | transcription start site region 141928 | |
Tssr141929 | 16 | 23 | - | TSS region | transcription start site region 141929 | |
Tssr139214 | 16 | 17 | + | TSS region | transcription start site region 139214 | |
Tssr139215 | 16 | 16 | + | TSS region | transcription start site region 139215 | |
Gm32624 | 16 | 60446 | + | lincRNA gene | predicted gene, 32624 | |
Gm25715 | 16 | 124 | + | snoRNA gene | predicted gene, 25715 | |
Gm38477 | 16 | 48345 | - | lincRNA gene | predicted gene, 38477 | |
Tssr141930 | 16 | 9 | - | TSS region | transcription start site region 141930 | |
Gm32865 | 16 | 3403 | - | lincRNA gene | predicted gene, 32865 | |
Tssr141931 | 16 | 50 | - | TSS region | transcription start site region 141931 | |
Gm41484 | 16 | 5856 | - | lncRNA gene | predicted gene, 41484 | |
Cpgi8393 | 16 | 308 | CpG island | CpG island 8393 | ||
D16Mit69 | 16 | 76 | DNA segment | DNA segment, Chr 16, Massachusetts Institute of Technology 69 | ||
Tssr139216 | 16 | 8 | + | TSS region | transcription start site region 139216 | |
Cpgi8394 | 16 | 558 | CpG island | CpG island 8394 | ||
Tssr141932 | 16 | 8 | - | TSS region | transcription start site region 141932 | |
N6amt1 | 16 | 14464 | + | protein coding gene | N-6 adenine-specific DNA methyltransferase 1 (putative) | |
Tssr139217 | 16 | 45 | + | TSS region | transcription start site region 139217 | |
Ltn1 | 16 | 55961 | - | protein coding gene | listerin E3 ubiquitin protein ligase 1 | |
Gm25896 | 16 | 135 | - | snoRNA gene | predicted gene, 25896 | |
Cpgi8395 | 16 | 832 | CpG island | CpG island 8395 | ||
Tssr141933 | 16 | 64 | - | TSS region | transcription start site region 141933 | |
Tssr141934 | 16 | 16 | - | TSS region | transcription start site region 141934 | |
Rwdd2b | 16 | 7166 | - | protein coding gene | RWD domain containing 2B | |
Cpgi8396 | 16 | 262 | CpG island | CpG island 8396 | ||
Cpgi8397 | 16 | 625 | CpG island | CpG island 8397 | ||
Tssr141935 | 16 | 44 | - | TSS region | transcription start site region 141935 | |
Tssr141936 | 16 | 61 | - | TSS region | transcription start site region 141936 | |
Tssr139218 | 16 | 35 | + | TSS region | transcription start site region 139218 | |
Tssr141937 | 16 | 4 | - | TSS region | transcription start site region 141937 | |
Usp16 | 16 | 28807 | + | protein coding gene | ubiquitin specific peptidase 16 | |
Cpgi8398 | 16 | 939 | CpG island | CpG island 8398 | ||
Tssr139219 | 16 | 11 | + | TSS region | transcription start site region 139219 | |
Tssr139220 | 16 | 65 | + | TSS region | transcription start site region 139220 | |
Cct8 | 16 | 12544 | - | protein coding gene | chaperonin containing Tcp1, subunit 8 (theta) | |
Tssr141938 | 16 | 30 | - | TSS region | transcription start site region 141938 | |
Tssr141939 | 16 | 22 | - | TSS region | transcription start site region 141939 | |
Cpgi8399 | 16 | 1115 | CpG island | CpG island 8399 | ||
Tssr141940 | 16 | 13 | - | TSS region | transcription start site region 141940 | |
Tssr141941 | 16 | 54 | - | TSS region | transcription start site region 141941 | |
Tssr139221 | 16 | 79 | + | TSS region | transcription start site region 139221 | |
B130034C11Rik | 16 | 7965 | + | lncRNA gene | RIKEN cDNA B130034C11 gene | |
Gm24891 | 16 | 135 | - | snoRNA gene | predicted gene, 24891 | |
Rpl31-ps4 | 16 | 389 | - | pseudogene | ribosomal protein L31, pseudogene 4 | |
Tssr139222 | 16 | 29 | + | TSS region | transcription start site region 139222 | |
Map3k7cl | 16 | 42006 | + | protein coding gene | Map3k7 C-terminal like |