Gene symbol |
Chromo- some |
Coordinates (bp, mm10) |
Size (bp) |
Strand |
Feature Type |
Gene name |
---|---|---|---|---|---|---|
Bwtn1 | 16 | 65603359 | QTL | body weight at necropsy 1 | ||
Pod | 16 | 10805481 | QTL | plasticity of ocular dominance | ||
Del(16Hspa13-App)3Yah | 16 | 9418762 | cytogenetic marker | deletion, Chr 16, Yann Herault 3 | ||
Dp(16Hspa13-App)2Yah | 16 | 9418762 | chromosomal duplication | duplication, Chr 16, Yann Herault 2 | ||
D16Mit223 | 16 | 322 | DNA segment | DNA Segment, Chr 16, Massachusetts Institute of Technology 223 | ||
Gm41481 | 16 | 24006 | - | lincRNA gene | predicted gene, 41481 | |
Gm49562 | 16 | 402 | - | pseudogene | predicted gene, 49562 | |
Gm7295 | 16 | 1385 | + | pseudogene | predicted gene 7295 | |
Gm24508 | 16 | 106 | + | snRNA gene | predicted gene, 24508 | |
Tssr139143 | 16 | 21 | + | TSS region | transcription start site region 139143 | |
Tssr139144 | 16 | 21 | + | TSS region | transcription start site region 139144 | |
4930553E22Rik | 16 | 4362 | + | lincRNA gene | RIKEN cDNA 4930553E22 gene | |
Gm6032 | 16 | 1137 | - | pseudogene | predicted gene 6032 | |
A730009L09Rik | 16 | 8767 | + | protein coding gene | RIKEN cDNA A730009L09 gene | |
Tssr139145 | 16 | 19 | + | TSS region | transcription start site region 139145 | |
Gm32073 | 16 | 1060 | + | lncRNA gene | predicted gene, 32073 | |
Tssr141854 | 16 | 16 | - | TSS region | transcription start site region 141854 | |
Cpgi8381 | 16 | 365 | CpG island | CpG island 8381 | ||
Tssr141855 | 16 | 10 | - | TSS region | transcription start site region 141855 | |
Tssr139146 | 16 | 3 | + | TSS region | transcription start site region 139146 | |
Gm2477 | 16 | 2328 | - | pseudogene | predicted gene 2477 | |
Tssr139147 | 16 | 18 | + | TSS region | transcription start site region 139147 | |
Tssr139148 | 16 | 12 | + | TSS region | transcription start site region 139148 | |
Gm25292 | 16 | 321 | - | unclassified non-coding RNA gene | predicted gene, 25292 | |
Tssr141856 | 16 | 6 | - | TSS region | transcription start site region 141856 | |
Tssr139149 | 16 | 5 | + | TSS region | transcription start site region 139149 | |
Gm2349 | 16 | 619 | + | pseudogene | predicted gene 2349 | |
Tssr139150 | 16 | 5 | + | TSS region | transcription start site region 139150 | |
4930529L06Rik | 16 | 5358 | + | lncRNA gene | RIKEN cDNA 4930529L06 gene | |
4930551I23Rik | 16 | 9230 | + | lincRNA gene | RIKEN cDNA 4930551I23 gene | |
Tssr139151 | 16 | 44 | + | TSS region | transcription start site region 139151 | |
Tssr139152 | 16 | 6 | + | TSS region | transcription start site region 139152 | |
Tssr139153 | 16 | 19 | + | TSS region | transcription start site region 139153 | |
Cpgi8382 | 16 | 971 | CpG island | CpG island 8382 | ||
Tssr139154 | 16 | 17 | + | TSS region | transcription start site region 139154 | |
Tssr139155 | 16 | 17 | + | TSS region | transcription start site region 139155 | |
Tssr139156 | 16 | 11 | + | TSS region | transcription start site region 139156 | |
Tssr139157 | 16 | 47 | + | TSS region | transcription start site region 139157 | |
Tssr139158 | 16 | 21 | + | TSS region | transcription start site region 139158 | |
Tssr141857 | 16 | 14 | - | TSS region | transcription start site region 141857 | |
Tssr139159 | 16 | 14 | + | TSS region | transcription start site region 139159 | |
Tssr139160 | 16 | 4 | + | TSS region | transcription start site region 139160 | |
Tssr139161 | 16 | 9 | + | TSS region | transcription start site region 139161 | |
Tssr139162 | 16 | 15 | + | TSS region | transcription start site region 139162 | |
Tssr139163 | 16 | 8 | + | TSS region | transcription start site region 139163 | |
Tssr139164 | 16 | 12 | + | TSS region | transcription start site region 139164 | |
Tssr139165 | 16 | 21 | + | TSS region | transcription start site region 139165 | |
Tssr139166 | 16 | 12 | + | TSS region | transcription start site region 139166 | |
Tssr139167 | 16 | 5 | + | TSS region | transcription start site region 139167 | |
Tssr139168 | 16 | 12 | + | TSS region | transcription start site region 139168 | |
Tssr139169 | 16 | 11 | + | TSS region | transcription start site region 139169 | |
Tssr139170 | 16 | 11 | + | TSS region | transcription start site region 139170 | |
Tssr139171 | 16 | 14 | + | TSS region | transcription start site region 139171 | |
Tssr139172 | 16 | 11 | + | TSS region | transcription start site region 139172 | |
Mir155hg | 16 | 2222 | + | lincRNA gene | Mir155 host gene (non-protein coding) | |
Mir155 | 16 | 64 | + | miRNA gene | microRNA 155 | |
Tssr139173 | 16 | 4 | + | TSS region | transcription start site region 139173 | |
Tssr139174 | 16 | 3 | + | TSS region | transcription start site region 139174 | |
Tssr139175 | 16 | 14 | + | TSS region | transcription start site region 139175 | |
Tssr139176 | 16 | 11 | + | TSS region | transcription start site region 139176 | |
Mrpl39 | 16 | 18166 | - | protein coding gene | mitochondrial ribosomal protein L39 | |
Tssr141858 | 16 | 13 | - | TSS region | transcription start site region 141858 | |
Tssr141859 | 16 | 22 | - | TSS region | transcription start site region 141859 | |
Cpgi8383 | 16 | 1012 | CpG island | CpG island 8383 | ||
Tssr141860 | 16 | 50 | - | TSS region | transcription start site region 141860 | |
Tssr141861 | 16 | 11 | - | TSS region | transcription start site region 141861 | |
Tssr141862 | 16 | 40 | - | TSS region | transcription start site region 141862 | |
Tssr141863 | 16 | 11 | - | TSS region | transcription start site region 141863 | |
Tssr141864 | 16 | 11 | - | TSS region | transcription start site region 141864 | |
Gm26153 | 16 | 126 | + | snoRNA gene | predicted gene, 26153 | |
Gm32202 | 16 | 7472 | - | lncRNA gene | predicted gene, 32202 | |
Tssr141865 | 16 | 32 | - | TSS region | transcription start site region 141865 | |
Tssr141866 | 16 | 29 | - | TSS region | transcription start site region 141866 | |
Tssr139177 | 16 | 5 | + | TSS region | transcription start site region 139177 | |
Tssr139178 | 16 | 3 | + | TSS region | transcription start site region 139178 | |
Tssr139179 | 16 | 20 | + | TSS region | transcription start site region 139179 | |
Tssr139180 | 16 | 14 | + | TSS region | transcription start site region 139180 | |
Cpgi8384 | 16 | 1306 | CpG island | CpG island 8384 | ||
Tssr139181 | 16 | 7 | + | TSS region | transcription start site region 139181 | |
Jam2 | 16 | 51805 | + | protein coding gene | junction adhesion molecule 2 | |
Tssr139182 | 16 | 9 | + | TSS region | transcription start site region 139182 | |
Tssr139183 | 16 | 11 | + | TSS region | transcription start site region 139183 | |
Tssr139184 | 16 | 22 | + | TSS region | transcription start site region 139184 | |
Tssr139185 | 16 | 9 | + | TSS region | transcription start site region 139185 | |
Tssr139186 | 16 | 31 | + | TSS region | transcription start site region 139186 | |
Tssr139187 | 16 | 13 | + | TSS region | transcription start site region 139187 | |
Tssr139188 | 16 | 11 | + | TSS region | transcription start site region 139188 | |
Tssr139189 | 16 | 62 | + | TSS region | transcription start site region 139189 | |
Tssr139190 | 16 | 11 | + | TSS region | transcription start site region 139190 | |
Tssr141867 | 16 | 2 | - | TSS region | transcription start site region 141867 | |
Tssr139191 | 16 | 5 | + | TSS region | transcription start site region 139191 | |
Tssr139192 | 16 | 10 | + | TSS region | transcription start site region 139192 | |
Tssr139193 | 16 | 14 | + | TSS region | transcription start site region 139193 | |
Gm46557 | 16 | 3975 | - | lncRNA gene | predicted gene, 46557 | |
Gm25908 | 16 | 97 | + | rRNA gene | predicted gene, 25908 | |
Atp5j | 16 | 7754 | - | protein coding gene | ATP synthase, H+ transporting, mitochondrial F0 complex, subunit F | |
Tssr141868 | 16 | 13 | - | TSS region | transcription start site region 141868 | |
Cpgi8385 | 16 | 1809 | CpG island | CpG island 8385 | ||
Tssr141869 | 16 | 26 | - | TSS region | transcription start site region 141869 | |
Tssr141870 | 16 | 9 | - | TSS region | transcription start site region 141870 | |
Tssr139194 | 16 | 7 | + | TSS region | transcription start site region 139194 | |
Tssr139195 | 16 | 40 | + | TSS region | transcription start site region 139195 | |
Gabpa | 16 | 28854 | + | protein coding gene | GA repeat binding protein, alpha | |
Tssr139196 | 16 | 12 | + | TSS region | transcription start site region 139196 | |
Tssr141871 | 16 | 12 | - | TSS region | transcription start site region 141871 | |
Tssr141872 | 16 | 36 | - | TSS region | transcription start site region 141872 | |
Tssr139197 | 16 | 13 | + | TSS region | transcription start site region 139197 | |
Tssr139198 | 16 | 27 | + | TSS region | transcription start site region 139198 | |
Tssr141873 | 16 | 25 | - | TSS region | transcription start site region 141873 | |
Tssr141874 | 16 | 16 | - | TSS region | transcription start site region 141874 | |
Tssr139199 | 16 | 14 | + | TSS region | transcription start site region 139199 | |
Tssr141875 | 16 | 10 | - | TSS region | transcription start site region 141875 | |
Tssr139200 | 16 | 11 | + | TSS region | transcription start site region 139200 | |
Tssr139201 | 16 | 61 | + | TSS region | transcription start site region 139201 | |
Tssr141876 | 16 | 18 | - | TSS region | transcription start site region 141876 | |
Tssr141877 | 16 | 50 | - | TSS region | transcription start site region 141877 | |
Tssr141878 | 16 | 60 | - | TSS region | transcription start site region 141878 | |
Tssr141879 | 16 | 9 | - | TSS region | transcription start site region 141879 | |
Tssr141880 | 16 | 14 | - | TSS region | transcription start site region 141880 | |
Tssr139202 | 16 | 9 | + | TSS region | transcription start site region 139202 | |
Tssr139203 | 16 | 6 | + | TSS region | transcription start site region 139203 | |
Cpgi8386 | 16 | 179 | CpG island | CpG island 8386 | ||
Gm49568 | 16 | 1170 | - | pseudogene | predicted gene, 49568 | |
D16Mit190 | 16 | 103 | DNA segment | DNA segment, Chr 16, Massachusetts Institute of Technology 190 | ||
App | 16 | 221286 | - | protein coding gene | amyloid beta (A4) precursor protein | |
Del(16App-Runx1)5Yah | 16 | 7873408 | chromosomal deletion | deletion, Chr 16, Yann Herault 5 | ||
Tssr141881 | 16 | 37 | - | TSS region | transcription start site region 141881 | |
Tssr141882 | 16 | 23 | - | TSS region | transcription start site region 141882 | |
Gm10791 | 16 | 7237 | + | antisense lncRNA gene | predicted gene 10791 | |
Tssr141883 | 16 | 13 | - | TSS region | transcription start site region 141883 | |
Tssr141884 | 16 | 15 | - | TSS region | transcription start site region 141884 | |
Gm49228 | 16 | 395 | + | pseudogene | predicted gene, 49228 | |
Tssr141885 | 16 | 44 | - | TSS region | transcription start site region 141885 | |
Tssr141886 | 16 | 3 | - | TSS region | transcription start site region 141886 | |
Tssr141887 | 16 | 4 | - | TSS region | transcription start site region 141887 | |
Tssr139204 | 16 | 20 | + | TSS region | transcription start site region 139204 | |
Tssr139205 | 16 | 50 | + | TSS region | transcription start site region 139205 | |
Tssr141888 | 16 | 17 | - | TSS region | transcription start site region 141888 | |
Tssr139206 | 16 | 32 | + | TSS region | transcription start site region 139206 | |
Cpgi8387 | 16 | 470 | CpG island | CpG island 8387 | ||
Tssr141889 | 16 | 15 | - | TSS region | transcription start site region 141889 | |
Tssr141890 | 16 | 15 | - | TSS region | transcription start site region 141890 | |
Tssr141891 | 16 | 15 | - | TSS region | transcription start site region 141891 | |
Tssr141892 | 16 | 20 | - | TSS region | transcription start site region 141892 | |
Gm49227 | 16 | 3281 | + | antisense lncRNA gene | predicted gene, 49227 | |
Tssr141893 | 16 | 22 | - | TSS region | transcription start site region 141893 | |
Tssr141894 | 16 | 16 | - | TSS region | transcription start site region 141894 | |
Tssr141895 | 16 | 30 | - | TSS region | transcription start site region 141895 | |
Tssr141896 | 16 | 5 | - | TSS region | transcription start site region 141896 | |
Tssr139207 | 16 | 46 | + | TSS region | transcription start site region 139207 | |
Tssr4946 | 16 | 7 | - | TSS region | transcription start site region 4946 | |
Tssr141897 | 16 | 37 | - | TSS region | transcription start site region 141897 | |
Gm49226 | 16 | 6445 | + | antisense lncRNA gene | predicted gene, 49226 | |
Tssr139208 | 16 | 18 | + | TSS region | transcription start site region 139208 | |
Tssr141898 | 16 | 4 | - | TSS region | transcription start site region 141898 | |
Tssr141899 | 16 | 23 | - | TSS region | transcription start site region 141899 | |
Gm27295 | 16 | 152 | + | snoRNA gene | predicted gene, 27295 | |
Cpgi8388 | 16 | 1739 | CpG island | CpG island 8388 | ||
Tssr141900 | 16 | 26 | - | TSS region | transcription start site region 141900 | |
Tssr141901 | 16 | 18 | - | TSS region | transcription start site region 141901 | |
Gm41482 | 16 | 2151 | + | lncRNA gene | predicted gene, 41482 | |
Gm41483 | 16 | 54315 | + | lncRNA gene | predicted gene, 41483 | |
D16Mit179 | 16 | 138 | DNA segment | DNA segment, Chr 16, Massachusetts Institute of Technology 179 | ||
Cyyr1 | 16 | 98047 | - | protein coding gene | cysteine and tyrosine-rich protein 1 | |
Tssr141902 | 16 | 4 | - | TSS region | transcription start site region 141902 | |
Tssr141903 | 16 | 11 | - | TSS region | transcription start site region 141903 | |
Tssr141904 | 16 | 2 | - | TSS region | transcription start site region 141904 | |
Tssr141905 | 16 | 4 | - | TSS region | transcription start site region 141905 | |
Tssr141906 | 16 | 8 | - | TSS region | transcription start site region 141906 | |
Tssr139209 | 16 | 10 | + | TSS region | transcription start site region 139209 | |
Cpgi8389 | 16 | 286 | CpG island | CpG island 8389 | ||
Tssr141907 | 16 | 24 | - | TSS region | transcription start site region 141907 | |
Tssr4947 | 16 | 3 | - | TSS region | transcription start site region 4947 | |
Tssr141908 | 16 | 16 | - | TSS region | transcription start site region 141908 | |
Tssr141909 | 16 | 8 | - | TSS region | transcription start site region 141909 | |
Gm2541 | 16 | 707 | - | pseudogene | predicted pseudogene 2541 | |
Gm6278 | 16 | 771 | + | pseudogene | predicted gene 6278 | |
Adamts1 | 16 | 9286 | - | protein coding gene | a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 1 | |
Cpgi8390 | 16 | 2235 | CpG island | CpG island 8390 | ||
Tssr141910 | 16 | 4 | - | TSS region | transcription start site region 141910 | |
Tssr141911 | 16 | 15 | - | TSS region | transcription start site region 141911 | |
Pgia10 | 16 | 104 | QTL | proteoglycan induced arthritis 10 | ||
D16Mit152 | 16 | 104 | DNA segment | DNA segment, Chr 16, Massachusetts Institute of Technology 152 | ||
Tssr141912 | 16 | 6 | - | TSS region | transcription start site region 141912 | |
4930556C24Rik | 16 | 7558 | + | lincRNA gene | RIKEN cDNA 4930556C24 gene | |
Tssr139210 | 16 | 5 | + | TSS region | transcription start site region 139210 | |
Tssr139211 | 16 | 11 | + | TSS region | transcription start site region 139211 | |
Adamts5 | 16 | 42968 | - | protein coding gene | a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 5 (aggrecanase-2) | |
Cpgi8391 | 16 | 1241 | CpG island | CpG island 8391 | ||
Tssr141913 | 16 | 22 | - | TSS region | transcription start site region 141913 | |
Gm46558 | 16 | 5288 | + | lncRNA gene | predicted gene, 46558 | |
Tssr141914 | 16 | 22 | - | TSS region | transcription start site region 141914 | |
Tssr141915 | 16 | 15 | - | TSS region | transcription start site region 141915 | |
Tssr141916 | 16 | 15 | - | TSS region | transcription start site region 141916 | |
Tssr141917 | 16 | 30 | - | TSS region | transcription start site region 141917 | |
Cpgi8392 | 16 | 679 | CpG island | CpG island 8392 | ||
Tssr141918 | 16 | 10 | - | TSS region | transcription start site region 141918 | |
Tssr141919 | 16 | 26 | - | TSS region | transcription start site region 141919 | |
Tssr141920 | 16 | 15 | - | TSS region | transcription start site region 141920 | |
Tssr141921 | 16 | 15 | - | TSS region | transcription start site region 141921 |