Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:8363472-8663497

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39 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm29936 16 8338906 to 8365012 26106 - lncRNA gene predicted gene, 29936
Gm24579 16 8402814 to 8402957 143 + snoRNA gene predicted gene, 24579
Tmem114 16 8409276 to 8425136 15860 - protein coding gene transmembrane protein 114
Cpgi7937 16 8424209 to 8425223 1014 CpG island CpG island 7937
Tssr139856 16 8425104 to 8425144 40 - TSS region transcription start site region 139856
Tssr139857 16 8425150 to 8425161 11 - TSS region transcription start site region 139857
Gm25782 16 8449498 to 8449786 288 - unclassified non-coding RNA gene predicted gene, 25782
Gm30012 16 8457687 to 8473692 16005 - lncRNA gene predicted gene, 30012
Cpgi7938 16 8470608 to 8471285 677 CpG island CpG island 7938
Mettl22 16 8470751 to 8490205 19454 + protein coding gene methyltransferase like 22
Tssr136990 16 8470763 to 8470807 44 + TSS region transcription start site region 136990
Tssr139858 16 8471079 to 8471107 28 - TSS region transcription start site region 139858
Gm23706 16 8480660 to 8480741 81 - snoRNA gene predicted gene, 23706
Cpgi7939 16 8513146 to 8513742 596 CpG island CpG island 7939
Abat 16 8513429 to 8621568 108139 + protein coding gene 4-aminobutyrate aminotransferase
Tssr136991 16 8513472 to 8513497 25 + TSS region transcription start site region 136991
Tssr136992 16 8594677 to 8594680 3 + TSS region transcription start site region 136992
Gm18792 16 8612812 to 8613451 639 + pseudogene predicted gene, 18792
Tssr136993 16 8618894 to 8618904 10 + TSS region transcription start site region 136993
Gm9851 16 8618948 to 8621217 2269 protein coding gene predicted gene 9851
Tssr136994 16 8619409 to 8619421 12 + TSS region transcription start site region 136994
Tssr136995 16 8619490 to 8619499 9 + TSS region transcription start site region 136995
Tssr136996 16 8619508 to 8619515 7 + TSS region transcription start site region 136996
Tssr136997 16 8619597 to 8619623 26 + TSS region transcription start site region 136997
Tssr136998 16 8619797 to 8619811 14 + TSS region transcription start site region 136998
Gm22137 16 8623163 to 8623270 107 - miRNA gene predicted gene, 22137
Gm7541 16 8623186 to 8623720 534 - pseudogene predicted gene 7541
Tssr139859 16 8623927 to 8623933 6 - TSS region transcription start site region 139859
Gm49549 16 8625209 to 8625317 108 - pseudogene predicted gene, 49549
Tmem186 16 8633731 to 8637701 3970 - protein coding gene transmembrane protein 186
Cpgi7940 16 8636953 to 8638013 1060 CpG island CpG island 7940
Tssr139860 16 8637514 to 8637553 39 - TSS region transcription start site region 139860
Tssr139861 16 8637576 to 8637587 11 - TSS region transcription start site region 139861
Tssr139862 16 8637662 to 8637703 41 - TSS region transcription start site region 139862
Pmm2 16 8637707 to 8657549 19842 + protein coding gene phosphomannomutase 2
Tssr136999 16 8637712 to 8637776 64 + TSS region transcription start site region 136999
Tssr137000 16 8638009 to 8638029 20 + TSS region transcription start site region 137000
Carhsp1 16 8658580 to 8672153 13573 - protein coding gene calcium regulated heat stable protein 1
Tssr139863 16 8660613 to 8660637 24 - TSS region transcription start site region 139863