Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:82076254-84666733

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34 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Diobq 16 42377454 to 82534286 40156832 QTL diet-induced obesity QTL
Pod 16 73747957 to 84553438 10805481 QTL plasticity of ocular dominance
Gm41480 16 82172441 to 82194731 22290 + lincRNA gene predicted gene, 41480
D16Mit189 16 82534088 to 82534286 198 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 189
Gm23355 16 82543229 to 82543335 106 + snRNA gene predicted gene, 23355
Gm7559 16 82565208 to 82565937 729 + pseudogene predicted gene 7559
Gm21833 16 82828382 to 82829881 1499 + protein coding gene predicted gene, 21833
D16Ium48 16 83011259 to 83011518 259 DNA segment DNA segment, Chr 16, Indiana University Medical 48
D16Mit68 16 83145093 to 83145292 199 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 68
Rpl21-ps5 16 83371254 to 83371733 479 - pseudogene ribosomal protein L21, pseudogene 5
Gm49561 16 83565527 to 83565903 376 + pseudogene predicted gene, 49561
D16Mit223 16 83695236 to 83695558 322 DNA segment DNA Segment, Chr 16, Massachusetts Institute of Technology 223
Gm41481 16 84033378 to 84057384 24006 - lincRNA gene predicted gene, 41481
Gm49562 16 84219285 to 84219687 402 - pseudogene predicted gene, 49562
Gm7295 16 84246311 to 84247696 1385 + pseudogene predicted gene 7295
Gm24508 16 84294535 to 84294641 106 + snRNA gene predicted gene, 24508
Tssr139143 16 84301745 to 84301766 21 + TSS region transcription start site region 139143
Tssr139144 16 84371130 to 84371151 21 + TSS region transcription start site region 139144
4930553E22Rik 16 84371143 to 84375505 4362 + lincRNA gene RIKEN cDNA 4930553E22 gene
Gm6032 16 84513051 to 84514188 1137 - pseudogene predicted gene 6032
A730009L09Rik 16 84515121 to 84523888 8767 + protein coding gene RIKEN cDNA A730009L09 gene
Tssr139145 16 84557149 to 84557168 19 + TSS region transcription start site region 139145
Gm32073 16 84558301 to 84559361 1060 + lncRNA gene predicted gene, 32073
Tssr141854 16 84583518 to 84583534 16 - TSS region transcription start site region 141854
Cpgi8381 16 84583725 to 84584090 365 CpG island CpG island 8381
Tssr141855 16 84585057 to 84585067 10 - TSS region transcription start site region 141855
Tssr139146 16 84585477 to 84585480 3 + TSS region transcription start site region 139146
Gm2477 16 84598878 to 84601206 2328 - pseudogene predicted gene 2477
Tssr139147 16 84605556 to 84605574 18 + TSS region transcription start site region 139147
Tssr139148 16 84606490 to 84606502 12 + TSS region transcription start site region 139148
Gm25292 16 84619807 to 84620128 321 - unclassified non-coding RNA gene predicted gene, 25292
Tssr141856 16 84621564 to 84621570 6 - TSS region transcription start site region 141856
Tssr139149 16 84640169 to 84640174 5 + TSS region transcription start site region 139149
Gm2349 16 84647373 to 84647992 619 + pseudogene predicted gene 2349