Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:80652216-82933998

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33 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Diobq 16 42377454 to 82534286 40156832 QTL diet-induced obesity QTL
Gm24773 16 80685225 to 80685323 98 + snRNA gene predicted gene, 24773
Gm49578 16 80710944 to 80711491 547 + pseudogene predicted gene, 49578
Gm19867 16 80726669 to 80727153 484 + pseudogene predicted gene, 19867
Fkbp1a-ps3 16 80949649 to 80949966 317 + pseudogene FK506 binding protein 1a, pseudogene 3
Cpgi8380 16 81200212 to 81201131 919 CpG island CpG island 8380
Tssr139132 16 81200664 to 81200680 16 + TSS region transcription start site region 139132
Ncam2 16 81200697 to 81624290 423593 + protein coding gene neural cell adhesion molecule 2
Tssr139133 16 81200708 to 81200717 9 + TSS region transcription start site region 139133
Tssr139134 16 81200725 to 81200739 14 + TSS region transcription start site region 139134
Tssr139135 16 81200747 to 81200766 19 + TSS region transcription start site region 139135
Tssr139136 16 81201273 to 81201277 4 + TSS region transcription start site region 139136
Tssr139137 16 81203373 to 81203376 3 + TSS region transcription start site region 139137
Tssr139138 16 81237733 to 81237744 11 + TSS region transcription start site region 139138
Tssr139139 16 81238706 to 81238711 5 + TSS region transcription start site region 139139
Gm26023 16 81261703 to 81262015 312 - unclassified non-coding RNA gene predicted gene, 26023
7120432I05Rik 16 81262318 to 81263593 1275 + unclassified gene RIKEN cDNA 7120432I05 gene
Tssr139140 16 81269705 to 81269714 9 + TSS region transcription start site region 139140
Tssr139141 16 81285345 to 81285350 5 + TSS region transcription start site region 139141
Gm49555 16 81290162 to 81292956 2794 + unclassified gene predicted gene, 49555
Tssr139142 16 81623758 to 81623762 4 + TSS region transcription start site region 139142
Gm49558 16 81792216 to 81793998 1782 + pseudogene predicted gene, 49558
Tssr4945 16 81850606 to 81850609 3 + TSS region transcription start site region 4945
Gm5676 16 81851175 to 81853193 2018 - pseudogene predicted gene 5676
Gm49559 16 81871510 to 81873735 2225 + unclassified gene predicted gene, 49559
Gm49560 16 81901284 to 81931911 30627 - lincRNA gene predicted gene, 49560
D16Mit177 16 81904973 to 81905087 114 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 177
Pgk1-ps1 16 81908998 to 81909462 464 + pseudogene phosphoglycerate kinase 1, pseudogene 1
Gm41480 16 82172441 to 82194731 22290 + lincRNA gene predicted gene, 41480
D16Mit189 16 82534088 to 82534286 198 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 189
Gm23355 16 82543229 to 82543335 106 + snRNA gene predicted gene, 23355
Gm7559 16 82565208 to 82565937 729 + pseudogene predicted gene 7559
Gm21833 16 82828382 to 82829881 1499 + protein coding gene predicted gene, 21833