Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:80460697-82364290

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32 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
D16Mit203 16 80517019 to 80517128 109 DNA segment DNA Segment, Chr 16, Massachusetts Institute of Technology 203
Etia 16 80517019 to 80517128 109 QTL ethanol induced activation
Bpq9 16 80530448 to 80530584 136 QTL blood pressure QTL 9
D16Mit158 16 80530448 to 80530584 136 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 158
Gm24773 16 80685225 to 80685323 98 + snRNA gene predicted gene, 24773
Gm49578 16 80710944 to 80711491 547 + pseudogene predicted gene, 49578
Gm19867 16 80726669 to 80727153 484 + pseudogene predicted gene, 19867
Fkbp1a-ps3 16 80949649 to 80949966 317 + pseudogene FK506 binding protein 1a, pseudogene 3
Cpgi8380 16 81200212 to 81201131 919 CpG island CpG island 8380
Tssr139132 16 81200664 to 81200680 16 + TSS region transcription start site region 139132
Ncam2 16 81200697 to 81624290 423593 + protein coding gene neural cell adhesion molecule 2
Tssr139133 16 81200708 to 81200717 9 + TSS region transcription start site region 139133
Tssr139134 16 81200725 to 81200739 14 + TSS region transcription start site region 139134
Tssr139135 16 81200747 to 81200766 19 + TSS region transcription start site region 139135
Tssr139136 16 81201273 to 81201277 4 + TSS region transcription start site region 139136
Tssr139137 16 81203373 to 81203376 3 + TSS region transcription start site region 139137
Tssr139138 16 81237733 to 81237744 11 + TSS region transcription start site region 139138
Tssr139139 16 81238706 to 81238711 5 + TSS region transcription start site region 139139
Gm26023 16 81261703 to 81262015 312 - unclassified non-coding RNA gene predicted gene, 26023
7120432I05Rik 16 81262318 to 81263593 1275 + unclassified gene RIKEN cDNA 7120432I05 gene
Tssr139140 16 81269705 to 81269714 9 + TSS region transcription start site region 139140
Tssr139141 16 81285345 to 81285350 5 + TSS region transcription start site region 139141
Gm49555 16 81290162 to 81292956 2794 + unclassified gene predicted gene, 49555
Tssr139142 16 81623758 to 81623762 4 + TSS region transcription start site region 139142
Gm49558 16 81792216 to 81793998 1782 + pseudogene predicted gene, 49558
Tssr4945 16 81850606 to 81850609 3 + TSS region transcription start site region 4945
Gm5676 16 81851175 to 81853193 2018 - pseudogene predicted gene 5676
Gm49559 16 81871510 to 81873735 2225 + unclassified gene predicted gene, 49559
Gm49560 16 81901284 to 81931911 30627 - lincRNA gene predicted gene, 49560
D16Mit177 16 81904973 to 81905087 114 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 177
Pgk1-ps1 16 81908998 to 81909462 464 + pseudogene phosphoglycerate kinase 1, pseudogene 1
Gm41480 16 82172441 to 82194731 22290 + lincRNA gene predicted gene, 41480